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发表论文

微生物代谢国家重点实验室2011-2015年发表论文目录

主要完成人: 发表日期:2016-09-26

 

序号

 

刊物名称、卷期页码

511

Formation of the delta(18,19) double bond and bis(spiroacetal) in salinomycin is atypically catalyzed by SlnM, a methyltransferase-like enzyme.

Jiang C, Qi Z, Kang Q, Liu J, Jiang M, Bai L

Angew Chem Int Edit, 2015, 54(31):9097-100

510

Recognition and cleavage of 5-methylcytosine DNA by bacterial SRA-HNH proteins

Han T, Yamada-Mabuchi M, Zhao G, Li L, Liu G, Ou HY, Deng Z, Zheng Y, He X

Nucleic Acids Res, 2015, 43(2):1147-59.

509

Mechanisms of acid tolerance in bacteria and prospects in biotechnology and bioremediation

Liu Y, Tang H, Lin Z, Xu P

Biotechnol Adv,

2015, 33(7):1484-92.

508

Production of C3 platform chemicals from CO2 by genetically engineered cyanobacteria

Wang Y, Tao F, Ni J, Li C, Xu P

Green Chem,

2015, 17(5): 3100–3110

507

An artificial enzymatic reaction cascade for a cell-free bio-system based on glycerol

Gao C, Li Z, Zhang LJ, Wang C, Li K, Ma CQ, Xu P

Green Chem,

2015, 17(2): 804–807

506

The bamboo-eating giant panda harbors a carnivore-like gut microbiota, with excessive seasonal variations

Xue Z, Zhang W, Wang L, Hou R, Zhang M, Fei L, Zhang X, Huang H, Bridgewater LC, Jiang Y, Jiang C, Zhao L, Pang X, Zhang Z

Mbio,

2015, 6(3):e00022-15.

505

Engineering the central biosynthetic and secondary metabolic pathways of Pseudomonas aeruginosa strain PA1201 to improve phenazine-1-carboxylic acid production

Jin K, Zhou L, Jiang H, Sun S, Fang Y, Liu J, Zhang X, He YW

Metab Eng,

2015, 32:30-8.

504

Engineering validamycin production by tandem deletion of gamma-butyrolactone receptor genes in Streptomyces hygroscopicus 5008

Tan GY, Peng Y, Lu C, Bai L, Zhong JJ

Metab Eng,

2015, 28:74-81.

503

Cytotoxic T cell responses are enhanced by antigen design involving the presentation of MUC1 peptide on cholera toxin B subunit

Lu W, Qiu L, Yan Z, Lin Z, Cao M, Hu C, Wang Z, Wang J, Yu Y, Cheng X, Cao P, Li R

Oncotarget,

2015, 6(33):34537-48.

502

Identification and characterization of naturally occurring DSF-family quorum sensing signal turnover system in the phytopathogen Xanthomonas

Zhou L, Wang XY, Sun S, Yang LC, Jiang BL, He YW

Environ Microbiol,

2015, 17(11):4646-58.

501

SecReT6: a web-based resource for type VI secretion systems found in bacteria

Li J, Yao Y, Xu HH, Hao L, Deng Z, Rajakumar K, Ou HY

Environ Microbiol,

2015, 17(7):2196-202.

500

Dual thermosensitive hydrogels assembled from the conserved C-terminal domain of spider dragline silk

Qian ZG, Zhou ML, Song WW, Xia XX

Biomacromolecules,

2015, 16(11):3704-11.

499

Chemical analysis of the Chinese liquor Luzhoulaojiao by comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry

Yao F, Yi B, Shen C, Tao F, Liu Y, Lin Z, Xu P

Sci Rep,

2015, 5:9553.

498

Comparative genome analysis reveals the molecular basis of nicotine degradation and survival capacities of Arthrobacter

Yao Y, Tang H, Su F, Xu P

Sci Rep,

2015, 5:8642.

497

Complete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence factors

Ou HY, Kuang SN, He X, Molgora BM, Ewing PJ, Deng Z, Osby M, Chen W, Xu HH

Sci Rep,

2015, 5:8643.

496

Differential responses of gut microbiota to the same prebiotic formula in oligotrophic and eutrophic batch fermentation systems

Long W, Xue Z, Zhang Q, Feng Z, Bridgewater L, Wang L, Zhao L, Pang X

Sci Rep,

2015, 5:13469.

495

Enhancing the light-driven production of D-lactate by engineering cyanobacterium using a combinational strategy

Li C, Tao F, Ni J, Wang Y, Yao F, Xu P

Sci Rep,

2015, 5:9777.

494

A filifactor alocis-centered co-occurrence group associates with periodontitis across different oral habitats

Chen H, Liu Y, Zhang M, Wang G, Qi Z, Bridgewater L, Zhao L, Tang Z, Pang X

Sci Rep,

2015, 5:9053.

493

Functional identification of a novel gene, moaE, for 3-Succinoylpyridine degradation in Pseudomonas putida S16

Jiang Y, Tang H, Wu G, Xu P

Sci Rep,

2015, 5:13464.

492

In vitro analysis of phosphorothioate modification of DNA reveals substrate recognition by a multiprotein complex

Cao B, Zheng X, Cheng Q, Yao F, Zheng T, Ramesh Babu I, Zhou H, Dedon P, You D

Sci Rep,

2015, 5:12513.

491

Mimicking a natural pathway for de novo biosynthesis: natural vanillin production from accessible carbon sources

Ni J, Tao F, Du H, Xu P

Sci Rep,

2015, 5:13670.

490

Modulation of gut microbiota by berberine and metformin during the treatment of high-fat diet-induced obesity in rats

Zhang X, Zhao Y, Xu J, Xue Z, Zhang M, Pang X, Zhang X, Zhao L

Sci Rep,

2015, 5:14405.

489

The multiple DSF-family QS signals are synthesized from carbohydrate and branched-chain amino acids via the FAS elongation cycle

Zhou L, Yu Y, Chen X, Diab AA, Ruan L, He J, Wang H, He YW

Sci Rep,

2015, 5:13294.

488

A novel crosstalk between TLR4- and NOD2-mediated signaling in the regulation of intestinal inflammation

Kim H, Zhao Q, Zheng H, Li X, Zhang T, Ma X

Sci Rep,

2015, 5:12018.

487

Synergistic algicidal effect and mechanism of two diketopiperazines produced by Chryseobacterium sp. strain GLY-1106 on the harmful bloom-forming Microcystis aeruginosa

Guo X, Liu X, Pan J, Yang H

Sci Rep,

2015, 5:14720.

486

Sustainable production of valuable compound 3-succinoyl-pyridine by genetically engineering Pseudomonas putida using the tobacco waste.

Wang WW, Xu P, and Tang HZ

Sci Rep,

2015, 5:16411.

485

Characterization of pseudooxynicotine amine oxidase of Pseudomonas putida S16 that is crucial for nicotine degradation.

Hu HY, Wang WW, Tang HZ, and Xu P

Sci Rep,

2015, 5:17770.

484

A functional 4-hydroxybenzoate degradation pathway in the
phytopathogen
Xanthomonas
campestris
is required for full
pathogenicity

Wang JY, Zhou L, Chen B, Sun S, Zhang W, Ming Li M, Tang HZ,
Jiang BL, Tang JL & He YW

Sci Rep,

2015, 5:18456.

483

Real-time ArcGIS and heterotrophic plate count based chloramine disinfectant control in water distribution system

Bai X, Zhi X, Zhu H, Meng M, Zhang M

Water Res,

2015, 68:812-20.

482

Sparsomycin biosynthesis highlights unusual module architecture and processing mechanism in non-ribosomal peptide synthetase

Rui Z, Huang W, Xu F, Han M, Liu X, Lin S, Zhang W

ACS Chem Biol,

2015, 10(8):1765-9.

481

Mapping the resistance-associated mobilome of a carbapenem-resistant Klebsiella pneumoniae strain reveals insights into factors shaping these regions and facilitates generation of a 'resistance-disarmed' model organism

Bi D, Jiang X, Sheng ZK, Ngmenterebo D, Tai C, Wang M, Deng Z, Rajakumar K, Ou HY

J Antimicrob Chemother,

2015, 70(10):2770-4.

480

Crystal structure of PnpCD, a two-subunit Hydroquinone 1,2-Dioxygenase, reveals a novel structural class of Fe2+-dependent dioxygenases

Liu S, Su T, Zhang C, Zhang WM, Zhu D, Su J, Wei T, Wang K, Huang Y, Guo L, Xu S, Zhou NY, Gu L

J Biol Chem,

2015, 290(40):24547-60.

479

Multicomponent kinetic analysis and theoretical studies on the phenolic intermediates in the oxidation of eugenol and isoeugenol catalyzed by laccase

Qi YB, Wang XL, Shi T, Liu S, Xu ZH, Li X, Shi X, Xu P, Zhao YL

Phys Chem Chem Phys, 2015, 17(44):29597-607.

478

A facile method for controlling the reaction equilibrium of sphingolipid ceramide N-deacylase for lyso-glycosphingolipid production

Huang FT, Han YB, Feng Y, Yang GY

J Lipid Res,

2015, 56(9):1836-42.

477

Regulation of DNA phosphorothioate modifications by the transcriptional regulator DptB in Salmonella

Cheng Q, Cao B, Yao F, Li J, Deng Z, You D

Mol Microbiol,

2015, 97(6):1186-94.

476

Reciprocating free-flow isoelectric focusing device for preparative separation of proteins

Kong FZ, Yang Y, Wang Y, Li GQ, Li S, Xiao H, Fan LY, Liu SR, Cao CX

J Chromatogr A,

2015 27, 1422:318-24.

475

Target protein separation and preparation by free-flow electrophoresis coupled with charge-to-mass ratio analysis

Shen QY, Guo CG, Yan J, Zhang Q, Xie HY, Jahan S, Fan LY, Xiao H, Cao CX

J Chromatogr A,

2015, 1397:73-80.

474

A highly efficient three-phase single drop microextraction technique for sample preconcentration

Jahan S, Xie H, Zhong R, Yan J, Xiao H, Fan L, Cao C

Analyst,

2015, 140(9):3193-200.

473

The drinking water treatment process as a potential source of affecting the bacterial antibiotic resistance

Bai XH, Ma XL, Xu FM, Li J, Zhang H, Xiao X

Sci Total Environ,

2015, 533:24-31.

472

Actinomycetes from the South China Sea sponges: isolation, diversity, and potential for aromatic polyketides discovery

Sun W, Zhang F, He L, Karthik L, Li Z

Front Microbiol,

2015, 6:1048.

471

Bacteria in the injection water differently impacts the bacterial communities of production wells in high-temperature petroleum reservoirs

Ren H, Xiong S, Gao G, Song Y, Cao G, Zhao L, Zhang X

Front Microbiol,

2015, 6:505.

470

Interactions of Dnd proteins involved in bacterial DNA phosphorothioate modification

Xiong W, Zhao G, Yu H, He X

Front Microbiol,

2015, 6:1139.

469

Recombinant expression library of Pyrococcus furiosus constructed by high-throughput cloning: a useful tool for functional and structural genomics

Yuan H, Peng L, Han Z, Xie JJ, Liu XP

Front Microbiol,

2015, 6:943.

468

The regulatory function of LexA is temperature-dependent in the deep-sea bacterium Shewanella piezotolerans WP3

Jian H, Xiong L, He Y, Xiao X

Front Microbiol,

2015, 6:627.

467

Metagenome and metatranscriptome revealed a highly active and intensive Sulfur cycle in an oil-Immersed hydrothermal chimney in Guaymas Basin

He Y, Feng XY, Fang J, Zhang Y, Xiao X

Front Microbiol,

2015, 6:1236.

466

Test and evaluation of ff99IDPs force field for intrinsically disordered proteins

Ye W, Ji D, Wang W, Luo R, Chen HF

J Chem Inf Model,

2015, 55(5):1021-9.

465

The host genotype and environment affect strain types of Bifidobacterium longum subsp. longum Inhabiting the Intestinal tracts of twins

Zhang M, Hang X, Tan J, Yang H

Appl Environ Microb,

2015, 81(14):4774-81.

464

Identification of a specific maleate hydratase in the direct hydrolysis route of the gentisate pathway

Liu K, Xu Y, Zhou NY

Appl Environ Microb,

2015, 81(17):5753-60.

463

molecular mechanism of nicotine degradation by a newly isolated strain, Ochrobactrum sp. strain SJY1

Yu H, Tang H, Zhu X, Li Y, Xu P

Appl Environ Microb,

2015, 81(1):272-81.

462

Molybdenum-containing nicotine hydroxylase genes in a nicotine
degradation pathway that is a variant of the pyridine and
pyrrolidine pathways

Yu H, Tang H, Li Y, Xu P

Appl Environ Microb,

2015, 81(24):8330-8.

461

pSW2, a novel low-temperature-inducible gene expression vector based on a filamentous phage of the deep-sea bacterium Shewanella piezotolerans WP3

Yang XW, Jian HH, Wang FP

Appl Environ Microb,

2015, 81(16):5519-26.

460

Quantitative proteomic analysis of microdissected oral epithelium for cancer biomarker discovery

Xiao H, Langerman A, Zhang Y, Khalid O, Hu S, Cao CX, Lingen MW, Wong DT

Oral Oncol,

2015, 51(11):1011-9.

459

A tunable isoelectric focusing via moving reaction boundary for two-dimensional gel electrophoresis and proteomics

Guo CG, Shang Z, Yan J, Li S, Li GQ, Liu RZ, Qing Y, Fan LY, Xiao H, Cao CX

Talanta,

2015, 137:197-203.

458

Accumulation of yellow Monascus pigments by extractive fermentation in nonionic surfactant micelle aqueous solution

Xiong X, Zhang X, Wu Z, Wang Z

Appl Microbiol Biot,

2015, 99(3):1173-80.

457

Algicidal activity of Bacillus sp. Lzh-5 and its algicidal compounds against Microcystis aeruginosa

Li Z, Geng M, Yang H

Appl Microbiol Biot,

2015, 99(2):981-90.

456

Comprehensive characterization of sphingolipid ceramide N-deacylase for the synthesis and fatty acid remodeling of glycosphingolipids

Han YB, Wu L, Rich JR, Huang FT, Withers SG, Feng Y, Yang GY

Appl Microbiol Biot,

2015, 99(16):6715-26.

455

Crude oil degradation by bacterial consortia under four different redox and temperature conditions

Xiong S, Li X, Chen J, Zhao L, Zhang H, Zhang X

Appl Microbiol Biot,

2015, 99(3):1451-61.

454

Engineered biosynthesis of pimaricin derivatives with improved antifungal activity and reduced cytotoxicity

Qi Z, Kang Q, Jiang C, Han M, Bai L

Appl Microbiol Biot,

2015, 99(16):6745-52.

453

Functional gene-based discovery of phenazines from the actinobacteria associated with marine sponges in the South China Sea

Karuppiah V, Li Y, Sun W, Feng G, Li Z

Appl Microbiol Biot,

2015, 99(14):5939-50.

452

Metabolic engineering of Escherichia coli to enhance acetol production from glycerol

Yao R, Liu Q, Hu H, Wood TK, Zhang X

Appl Microbiol Biot,

2015, 99(19):7945-52.

451

Positive and negative regulation of GlnR in validamycin A biosynthesis by binding to different loci in promoter region

Qu S, Kang Q, Wu H, Wang L, Bai L

Appl Microbiol Biot,

2015, 99(11):4771-83.

450

Relationship between acid tolerance and cell membrane in Bifidobacterium, revealed by comparative analysis of acid-resistant derivatives and their parental strains grown in medium with and without Tween 80

Yang X, Hang X, Zhang M, Liu X, Yang H

Appl Microbiol Biot,

2015, 99(12):5227-36.

449

Destabilization of alzheimer's abeta42 protofibrils with a novel drug candidate wgx-50 by molecular dynamics Simulations

Fan HM, Gu RX, Wang YJ, Pi YL, Zhang YH, Xu Q, Wei DQ

J Phys Chem B,

2015, 119(34):11196-202.

448

Recognition mechanism between Lac repressor and DNA with correlation network analysis

Xu L, Ye W, Jiang C, Yang J, Zhang J, Feng Y, Luo R, Chen HF

J Phys Chem B,

2015,119(7):2844-56.

447

Theoretical study on the relationship between Rp-phosphorothioation and base-step in S-DNA: based on energetic and structural analysis

Chen L, Wang XL, Shi T, Wu T, Deng Z, Zhao YL

J Phys Chem B,

2015, 119(2):474-81.

446

Active site loop conformation regulates promiscuous activity in a lactonase from Geobacillus kaustophilus HTA426

Zhang Y, An J, Yang GY, Bai A, Zheng B, Lou Z, Wu G, Ye W, Chen HF, Feng Y, Manco G

PloS One,

2015, 10(2):e0115130.

445

Elucidation of enzymatic mechanism of phenazine biosynthetic protein PhzF using QM/MM and MD simulations

Liu F, Zhao YL, Wang X, Hu H, Peng H, Wang W, Wang JF, Zhang X

PloS One,

2015, 10(9):e0139081.

444

Identification of the lomofungin biosynthesis gene cluster and associated flavin-dependent monooxygenase gene in Streptomyces lomondensis S015

Zhang C, Sheng C, Wang W, Hu H, Peng H, Zhang X

PloS One,

2015, 10(8):e0136228.

443

Mixed wastewater coupled with CO2 for microalgae culturing and nutrient removal

Yao L, Shi J, Miao X

PloS One,

2015, 10(9):e0139117.

442

Revealing the binding mode between respiratory syncytial virus fusion protein and benzimidazole-based inhibitors

Ji D, Ye W, Chen H

Mol Biosyst,

2015, 11(7):1857-66.

441

Preparation and characterization of yellow Monascus pigments

Zhong SJ, Zhang XH, Wang ZL.

Sep Purif Technol,

2015, 150:139-144

440

Design of hyperthermophilic lipase chimeras by key motif-directed recombination

Zhou X, Gao L, Yang G, Liu D, Bai A, Li B, Deng Z, Feng Y

Chembiochem.

2015, 16(3):455-62.

439

Kangiella profundi sp. nov., isolated from deep-sea sediment

Xu FD, Li XG, Xiao X, Xu J

Int J Syst Evol Microbiol. 2015, 65(7):2315-9.

438

Selectivity mechanism of ATP-competitive Inhibitors for PKB and PKA

Wu K, Pang J, Song D, Zhu Y, Wu C, Shao T, Chen H

Chem Biol Drug Des,

2015, 86(1):9-18.

437

Differences in acid tolerance between Bifidobacterium breve BB8 and its acid-resistant derivative B. breve BB8dpH, revealed by RNA-sequencing and physiological analysis

Yang X, Hang X, Tan J, Yang H

Anaerobe,

2015, 33:76-84.

436

Characterization of a novel thermostable patatin-like protein from a Guaymas basin metagenomic library

Fu L, He Y, Xu F, Ma Q, Wang F, Xu J

Extremophiles,

2015, 19(4):829-40.

435

(+)Terrein inhibits human hepatoma Bel7402 proliferation through cell cycle arrest

Zhang F, Mijiti M, Ding W, Song J, Yin Y, Sun W, Li Z

Oncol Rep,

2015, 33(3):1191-200.

434

Antitumor and antimetastatic activities of chloroform extract of medicinal mushroom Cordyceps taii in mouse models

Liu RM, Zhang XJ, Liang GY, Yang YF, Zhong JJ, Xiao JH

Bmc Complem Altern M,

2015, 15:216.

433

Erratum to: 'Antitumor and antimetastatic activities of chloroform extract of medicinal mushroom Cordyceps taii in mouse models'

Liu RM, Zhang XJ, Liang GY, Yang YF, Zhong JJ, Xiao JH

Bmc Complem Altern M,

2015, 15:284.

432

The alpha7 nAChR selective agonists as drug candidates for Alzheimer's disease

Fan H, Gu R, Wei D

Adv Exp Med Biol,

2015, 827:353-65.

431

An application of QM/MM simulation: the second protonation of cytochrome P450

Lian P, Wei D

Adv Exp Med Biol,

2015, 827:311-24.

430

Applications of rare event dynamics on the free energy calculations for membrane protein systems

Wang Y, Gu R, Fan H, Ulmschneider J, Wei D

Adv Exp Med Biol,

2015, 827:71-82.

429

Binding induced intrinsically disordered protein folding with molecular dynamics simulation

Chen H

Adv Exp Med Biol,

2015, 827:111-21.

428

Bioinformatics tools for discovery and functional analysis of single nucleotide polymorphisms

Li L, Wei D

Adv Exp Med Biol,

2015, 827:287-310.

427

Drug inhibition and proton conduction mechanisms of the influenza a M2 proton channel

Gu R, Liu LA, Wei D

Adv Exp Med Biol,

2015, 827:205-26.

426

Exploring the ligand-protein networks in traditional chinese medicine: current databases, methods and applications

Zhao M, Wei D

Adv Exp Med Biol,

2015, 827:227-57.

425

Human cytochrome P450 and personalized medicine

Chen Q, Wei D

Adv Exp Med Biol,

2015, 827:341-51.

424

Introduction to structural bioinformatics

Xu Q, Dai H, Zhao T, Wei D

Adv Exp Med Biol,

2015, 827:1-7.

423

Recent progress on structural bioinformatics research of cytochrome P450 and its impact on drug discovery

Zhang T, Wei D

Adv Exp Med Biol,

2015, 827:327-39.

422

A new alkaline lipase obtained from the metagenome of marine sponge Ircinia sp

Su J, Zhang F, Sun W, Karuppiah V, Zhang G, Li Z, Jiang Q

World J Microb Biot,

2015, 31(7):1093-102.

421

Two nucleoside receptors from Streptomyces coelicolor: expression of the genes and characterization of the recombinant proteins

Li F, Liang J, Wang W, Zhou X, Deng Z, Wang Z

Protein Expres Purif,

2015, 109:40-6.

420

Phylogenetic diversity of sulphate-reducing Desulfovibrio associated with three South China Sea sponges

Zhang D, Sun W, Feng G, Zhang F, Anbuchezhian R, Li Z, Jiang Q

Lett Appl Microbiol,

2015, 60(5):504-12.

419

Overexpression of afsR and optimization of metal chloride to improve lomofungin production in Streptomyces lomondensis S015

Wang W, Wang H, Hu H, Peng H, Zhang X

J Microbiol Biotechn

2015, 25(5):672-80.

418

[An efficient genetic knockout system based on linear DNA fragment homologous recombination for halophilic archaea]

Wang XL, Jiang C, Liu JH, Liu XP

Yi chuan,

2015, 37(4):388-95.

417

Isolation and structural identification of two bioactive phenazines from
Streptomyces griseoluteus P510

Luo Q, Hu HB, Peng HS, Zhang XH, Wang W

Chinese J Chem Eng,

2015, 699–703

416

Detection of erm(X)- mediated antibiotic resistance in Bifidobacterium longum subsp. longum.

Luo C, Hang X, Liu X, Zhang M, Yang X, Yang H.

Ann Microbiol,

2015, 65:1985–1991

415

Improved feature-based prediction of SNPs in human cytochrome P450 enzymes

Li L, Xiong Y, Zhang ZY, Guo Q, Xu Q, Liow HH, Zhang YH, Wei DQ

Interdiscip Sci,

2015, 7(1):65-77.

414

Molecular dynamics simulation studies of the wild type and E92Q/N155H mutant of Elvitegravir-resistance HIV-1 integrase

Chen Q, Cheng X, Wei D, Xu Q

Interdiscip Sci,

2015, 7(1):36-42.

413

Crystallization and preliminary X-ray analysis of the type IV restriction endonuclease ScoMcrA from Streptomyces coelicolor, which cleaves both Dcm-methylated DNA and phosphorothioated DNA

Liu G, Zhang Z, Zhao G, Deng Z, Wu G, He X

Acta Crystallogr F,

2015, 71(Pt 1):57-60.

412

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

Cao B, Chen C, DeMottMS, Cheng QX, Clark TA, Xiong XL, Zheng XQ, Zhou XF, Deng ZX, … You DL, Wang LR,Chen S, Dedon PC

Nat Commun, 2014, 5:3591

411

Microbial lactate utilization: Enzymes, pathogenesis, and regulation

Jiang TY, Gao C, Ma CQ, Xu P

Trends Microbiol, 2014, 22(10):589-599

410

Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry

Zhao G, Wu G, Zhang Y, Liu G, Han TS, Deng ZX, He XY

Nucleic Acids Res, 2014, 42(12):8115-8124

409

Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses

Meng J, Xu J, Qin D, He Y, Xiao X, Wang FP

Isme J, 2014, 8(3):650-659

408

Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways

Wang FP, Zhang Y, Chen Y, He Y, Qi J, Hinrichs KU, Zhang XX, Xiao X, Boon N

Isme J, 2014, 8(5):1069-1078

407

Biomineralization mediated by anaerobic methane-consuming cell consortia

Chen Y, Li YL, Zhou GT, Li H, Lin YT, Xiao X, Wang FP

Sci Rep, 2014, 16(4):5696

406

Green strategy from waste to value-added-chemical production: Efficient biosynthesis of 6-hydroxy-3-succinoyl-pyridine by an engineered biocatalyst

Yu H, Tang HZ, Xu P

Sci Rep, 2014, 23(4):5397

405

Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Lamellomorpha sp indicated by metagenomics

Li ZY, Wang YZ, He LM, Zheng HJ

Sci Rep, 2014, 27(4):3895

404

Genomic analysis of thermophilic Bacillus coagulans strains: Efficient producers for platform bio-chemicals

Su F, Xu P

Sci Rep, 2014, 29(4):3926

403

Hydrophobic drug-triggered self-assembly of nanoparticles from silk-elastin-like protein polymers for drug delivery

Xia XX, Wang M, Lin YA, Xu QB, Kaplan DL

Biomacromolecules, 2014, 15(3):908-914

402

Structural insights into the specific recognition of N-heterocycle biodenitrogenation-derived substrates by microbial amide hydrolases

Wu G, Chen DD, Tang HZ, Ren YL, Chen QH, Lv Y, Zhang ZY, Zhao YL, Yao YX, Xu P

Mol Microbiol, 2014, 91(5):1009-1021

401

An unusual repressor controls the expression of a crucial nicotine-degrading gene cluster in Pseudomonas putida S16

Wang LJ, Tang HZ, Yu H, Yao YX, Xu P

Mol Microbiol, 2014, 91(6):1252-1269

400

Pathological phenotypes and in vivo DNA cleavage by unrestrained activity of a phosphorothioate- based restriction system in Salmonella

Cao B, Cheng QX, Gu C, Yao F, DeMott MS, Zheng XQ, Deng ZX, Dedon PC, You DL

Mol Microbiol, 2014, 93(4):776-785

399

Efficient production of L-lactic acid using co-feeding strategy based on cane molasses/glucose carbon sources

Xu K, Xu P

Bioresour Technol, 2014, 15323-29

398

Efficient calcium lactate production by fermentation coupled with crystallization-based in situ product removal

Xu K, Xu P

Bioresour Technol, 2014, 16333-39

397

Efficient production of 2,3-butanediol from corn stover hydrolysate by using a thermophilic Bacillus licheniformis strain

Li LX, Li K, Wang K, Chen C, Gao C, Ma CQ, Xu P

Bioresour Technol, 2014, 170256-261

396

Biodiesel quality and biochemical changes of microalgae Chlorella pyrenoidosa and Scenedesmus obliquus in response to nitrate levels

Wu HQ, Miao XL

Bioresour Technol, 2014, 170421-427

395

Induction of ganoderic acid biosynthesis by Mn2+ in static liquid cultivation of Ganoderma lucidum

Xu YN, Xia XX, Zhong JJ

Biotechnol Bioeng, 2014, 111(11):2358-2365

394

New in situ capture quantitative (real-time) reverse transcription-PCR method as an alternative approach for determining inactivation of tulane virus

Wang DP, Xu SX, Yang D, Young GM, Tian P

Appl Microbiol Biotechnol, 2014, 80(7):2120-2124

393

Genetically engineered Pichia pastoris yeast for conversion of glucose to xylitol by a single-fermentation process

Cheng HR, Lv JY, Wang HW, Wang B, Li ZL, Deng ZX

Appl Microbiol Biotechnol, 2014, 98(8):3539-3552

392

Significance of agitation-induced shear stress on mycelium morphology and lavendamycin production by engineered Streptomyces flocculus

Xia X, Lin SJ, Xia XX, Cong FS, Zhong JJ

Appl Microbiol Biotechnol, 2014, 98(10):4399-4407

400

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A new strategy for highly efficient single-drop microextraction with a liquid-gas compound pendant drop

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Characterization of an algicidal bacterium Brevundimonas J4 and chemical defense of Synechococcus sp. BN60 against bacterium J4

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Characterization of the medium- and long-chain n-alkanes degrading Pseudomonas aeruginosa strain SJTD-1 and its alkane hydroxylase genes

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A recombinant adenovirus expressing CFP10, ESAT6, Ag85A and Ag85B of Mycobacterium tuberculosis elicits strong antigen-specific immune responses in mice

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New force field on modeling intrinsically disordered proteins

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Purification and characterization of a thermostable aliphatic amidase from the hyperthermophilic archaeon Pyrococcus yayanosii CH1

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X-ray structure of a Hg2+ complex of mercuric reductase (Mera):And QM/MM study of Hg2+ transfer between the C-terminal and buried catalytic site cysteine pairs

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Moving interaction boundary electrophoresis and its selective focusing of target guest molecule norfloxacin in urine by a cyclodextrin host

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Novel pyrrolobenzoxaboroles: Design, synthesis, and biological evaluation against Trypanosome brucei

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Quantitative investigation on the stacking of metal ions induced by another metal ion based on moving substitution boundary electrophoresis

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Improved heterologous erythromycin A production through expression plasmid re-design

Jiang M, Fang L, Pfeifer BA

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Molecular dynamics simulations of amyloid fibrils: an in silico approach

Ye W, Wang W, Jiang C, Yu QF, Chen HF

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Insight into the binding mode between HIV-1 integrase and pyrimidone analogue inhibitors with MD simulation and 3D-QSAR

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Discovering the roles of subsurface microorganisms: Progress and future of deep biosphere investigation

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Evidence from O-18 feeding studies for hydroxyl group donor in the reaction catalyzed by cytidylate hydroxymethylase MilA

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The resolution of aglinin A epimers and their NMR assignments

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Genome sequence of Klebsiella pneumoniae strain ATCC 25955, an oxygen-insensitive producer of 1, 3-propanediol

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Metagenome reveals potential microbial degradation of hydrocarbon coupled with sulfate reduction in an oil-immersed chimney from Guaymas Basin

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Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification.

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Elucidation of piericidin A1 biosynthetic locus revealed a thioesterase-dependent mechanism of α-pyridone ring formation.

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Unveiling the post-PKS redox tailoring steps in biosynthesis of the type II polyketide antitumor antibiotic xantholipin.

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Engineering of an industrial polyoxin producer for the rational production of hybrid peptidyl nucleoside antibiotics.

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Recent progress on bioinformatics, functional genomics, and metabolomics research of cytochrome P450 and its impact on drug discovery.

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Structural and functional analysis of validoxylamine A 7’-phosphate synthase ValL involved in validamycin A biosynthesis.

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Insight into the stability of cross-beta amyloid fibril from VEALYL short peptide with molecular dynamics simulation

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Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation.

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PLoS One,

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Food Chem,

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Involvement of Ser94 in RNase HIII from Chlamydophila pneumoniae in the recognition of a single ribonucleotide misincorporated into double-stranded DNA.

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A thermostable recombinant transaldolase with high activity over a broad pH range.

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Perstraction of intracellular pigments by submerged cultivation of Monascus in nonionic surfactant micelle aqueous solution.

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Structural analysis and biosynthetic engineering of a solubility-improved and less-hemolytic nystatin-like polyene in Pseudonocardia autotrophica.

Lee MJ, Kong D, Han K, Sherman DH, Bai L, Deng Z, Lin S, Kim ES

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Comparative analysis of temperature-dependent transcriptome of Pseudomonas aeruginosa strains from rhizosphere and human habitats.

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