two thousand and nine

1.Guijie LI, Xiaomin HANG, Jing TAN, Min ZHANG, Xianglong LIU, Daotang LI, Hong Yang (2009).A BSH volumetric activity dependent method for determination of coprecipitated cholesterol and the assimilation/coprecipitation proportion of cholesterol removal by Lactobacillus plantarum.Annals of Microbiology,59 (3) 1-7

 

2.Yang-Chun Yong and Jian-Jiang Zhong (2009).A Genetically Engineered Whole-Cell Pigment-Based Bacterial Biosensing System for Quantification of N-Butyryl Homoserine-Lactone Quorum-Sensing Signal.Biosensor & Bioelectronics ,  25: 41–47.

 

3.Qingqiao Tan, Dexian Dong,and Rongxiu Li (2009).A novel fractionation method prior to MS-based proteomics analysis using cascade biomimetic affinity chromatography.J Chromatogr B, 877, 3799-3805.

 

4.Su Chen, James F Palmer, Wei Zhang, Jing Shao, Si Li, Liu-Yin Fan, Ren Sun, Yu-Chao Dong, Cheng-Xi Cao (2009).A simple preparative free-flow electrophoresis joined with gratis gravity: I Gas cushion injector and self-balance collector instead of multiple channel pump.Electrophoresis, 30, 1998 -2007.

 

5.Li Z et.al (2009).Advances in marine microbial symbionts in the China Sea and related pharmaceutical metabolites.Marine Drugs,7:113-129.

 

6.Xu H, Zhang Y, Yang J, Mahmud T, Bai L, Deng Z (2009).Alternative epimerization in C(7)N-aminocyclitol biosynthesis is catalyzed by ValD, a large protein of the vicinal oxygen chelate superfamily.Chemistry & Biology, 16(5): 567-76.

 

7.Lei Song, Xuehong Zhang (2009).An Innovation for Ascertaining Genomic Islands in PAO1 and PA14 of Pseudomonas aeruginosa.Chinese Science Bulletin , 54:3991-3999.

 

8.Sun Y, He X, Liang J, Zhou X, Deng Z (2009).Analysis of functions in plasmid pHZ1358 influencing its genetic and structural stability in Streptomyces lividans 1326.Applied Microbiology and Bio technology, 82(2):303-10.

 

9.YueHan,Bingjie Yang,Fengli,Zhang,Xiaoling Miao,Zhiyong Li (2009).Characterization of antifungal chitinase from marine Streptomyces spDA11 associated with South China Sea sponge Craniella australiensis.Marine Biotechnology,  11: 132-140.

 

10.Chen W, Huang T, He X, Meng Q, You D, Bai L, Li J, Wu M, Li R, Xie Z, Zhou H, Zhou X, Tan H, Deng Z (2009).Characterization of the polyoxin biosynthetic gene cluster from Streptomyces cacaoi and engineered production of polyoxin H.Journal of Biological Chemistry. 2284(16):10627-38.

 

11.Cheng H, Li Z, Jiang N, Deng Z (2009).Cloning, purification and characterization of an NAD-Dependent D-Arabitol dehydrogenase from acetic acid bacterium, Acetobacter suboxydans.Protein J, 28(6):263-72.

 

12.Tan QQ, Dong DX, Ye L, Li RX (2009).Combined usage of cascade affinity fractionation and LC-MS/MS for the proteomics of adult mouse testis.J Sep Sci , 32, 1–9.

 

13.Qingqiao Tan, Dexian Dong, Rongxiu Li, Wangyi Liu (2009).Comparative Analysis of Depurination Catalyzed by Ricin A-chain on Synthetic 32mer and 25mer Oligoribonucleotides Mimicking the Sarcin/Ricin Domain of the Rat 28S rRNA and Ecoli 23S rRNA.Journal of Biotechnology, 139, 156-162.

 

14.Jie Jin, Jing Shao, Si Li, Wei Zhang, Liu-Yin Fan, Cheng-Xi Cao (2009).Computer simulation on a continuous moving chelation boundary in ethylenediaminetetraacetic acid-based sample sweeping in capillary electrophoresis.J Chromatogr A, 1216, 4913-4922.

 

15.Wenjin Ye, Xianglong Liu, Jin Tan, Dao-tang Li , Hong Yang (2009).Diversity and dynamics of microcystin-producing cyanobacteria in China’s third largest lake, lake Taihu.Harmful Algae, 8:637-644, 2009.

 

16.Xu T, Liang J, Chen S, Wang L, He X, You D, Wang Z, Li A, Xu Z, Zhou X, Deng Z (2009).DNA phosphorothioation in Streptomyces lividans: mutational analysis of the dnd locus.BMC Microbiology. 9: 41.

 

17.Ou HY, He X, Shao Y, Tai C, Rajakumar K, Deng Z (2009).dndDB: a database focused on phosphorothioation of the DNA backbone.PLoS One, 4(4):e5132.

 

18.Yueqiao Liao, Zhen-Hua Wei, Linquan Bai, Zixin Deng, Jian-Jiang Zhong (2009).Effect of Fermentation Temperature on Validamycin A Production by Streptomyces hygroscopicus 5008.Journal of Biotechnology,  142: 271-274.

 

19.Xiaoling Miao, Rongxiu Li, Hongyan Yao (2009).Effective acid-catalyzed transesterification for biodiesel production.Energy Conversion and Manage ment, 50: 2680-2684.

 

20.Liang J, Niu Q, Xu X, Luo Y, Zhou X, Deng Z, Wang Z (2009).Effective elimination of nucleic acids from bacterial protein samples for optimized blue native polyacrylamide gel electrophoresis.Electrophoresis, 30(14): 2454 -9.

 

21.Li L, Bai L, Zhou XF, Deng Z (2009).Enhanced validamycin production and gene expression at elevated temperature in Streptomyces hygroscopicus subsp jingangensis 5008.Chinese Science Bulletin, 54 (7) : 1204-09.

 

22.Wang L, Jin Y, Zhao L, Pang X and Zhang X (2009).ERIC-PCR-based strain-specific detection of phenol-degrading bacteria in activated sludge of wastewater treatment systems.Letters in Applied Microbiology,  49:522-528.

 

23.Liu-Yin Fan, Wei Yan, Cheng-Xi Cao, Wei Zhang, Qian Chen (2009).Experiments on moving interaction boundaries and their characteristics of focusing and probing of both guest and host target molecules.Anal Chim Acta,650, 111-117.

 

24.Yao F, Xu T, Zhou X, Deng Z, You D. (2009).Functional analysis of spfD gene involved in DNA phosphorothioation in Pseudomonas fluorescens Pf0-1.FEBS Lett. 583(4): 729-33.

 

25.Zhang Y, Bai L, Deng Z. (2009).Functional characterization of the first two actinomycete 4-amino-4-deoxychorismate lyase genes.Microbiology-SGM. 155(Pt7): 2450-9.

 

26.Zhang, H,Zhang,F, Li,Z (2009).Gene analysis, optimized production and property of marine lipase from Bacillus pumilus B106 associated with South China Sea sponge Halichondria rugosa.World Journal of Microbiology and biotechnology,25:1267-1274.

 

27.Xu H, Yang J, Bai L, Deng Z, Mahmud T (2009).Genetically engineered production of 1,1'-bis-valienamine and validienamycin in Streptomyces hygroscopicus and their conversion to valienamine.Applied Microbiology and Bio technology,81(5):895-902.

 

28.Zhang,W,Zhang,FL,Li,ZY,Miao,XL, Meng,QP,Zhang,XS 2009 (2009)Investigation of sponge-associated cultivable bacteria with polyketide synthase genes and antimicrobial activity in the South China Sea.Journal of Applied Microbiology , 107:567-575.

 

29.Lu JS 1, Huang XQ 1, Li K, Li SN, Zhang MY, Wang Y, Jiang HX, Xu YQ. (2009).LysR family transcriptional regulator PqsR as repressor of pyoluteorin biosynthesis and activator of phenazine-1-carboxylic acid biosynthesis in Pseudomonas sp. M18.Journal of Biotechnology,  143(1): 1-9.

 

30.L Sun, WQ Chen, ZX Deng, JJ Zhong (2009).Microbiological assay for quantitative determination of polyoxin B.Process Biochemistry ,44: 361-364.

 

31.Yan-Jie Xu, Si Li, Wei Zhang, Liu-Yin Fan, Jing Shao, Cheng-Xi Cao (2009).Moving reaction boundary and isoelectric focusing: IV Systemic study on Hjerten’s pH gradient mobilization.J Sep Sci 32, 585-596.

 

32.Yu, LL, Li, ZY, Peng, CS, Li, ZY, Guo,YW (2009).Neobacillamide A, a novel thiazole-containing alkaloid from the marine bacterium, Bacillus vaiismortis C89, that was associated with South China Sea sponge.Helvetica Chimica Acta,92:607-612.

 

33.Yu, LL, Li, ZY, Peng, CS, Li, ZY, Guo,YW (2009).Neobacillamide A, a novel thiazole-containing alkaloid from the marine bacterium, Bacillus vaiismortis C89, that was associated with South China Sea sponge.Dysidea avara Helvetica Chimica Acta,92:607-612.

 

34.Tang H Z, Wang L J, Meng X Z, Ma L Y, Wang S N, He X F, Wu G, Xu P (2009).Novel nicotine oxidoreductase-encoding gene involved in nicotine degradation by Pseudomonas putida strain S16.Appl Environ Microbiol,75(3): 772-778.

 

35.Xu P, Feng J H, Yu B, Li F L, Ma C Q,( 2009).Recent developments in biodesulfurization of fossil fuels.Adv Biochem Eng Bio technol  ,113: 255-274.

 

36.JJ Zhong, JH Xiao (2009).Secondary Metabolites from Higher Fungi: Discovery, Bioactivity, and Bioproduction.Advances in Biochemical Engineer  ing Biotechnology , 113: 79 -150.

 

37.Chuan Tian, Jing Tan, Xin Wu, Wenjin Ye, Xianglong Liu, Daotang Li, Hong Yang (2009).Spatiotemporal transition of bacterioplankton diversity in a large shallow hypertrophic freshwater lake, as determined by denaturing gradient gel electrophoresis.Journal of Plankton Research , 31(8): 885-897.

 

38.Yu Xin, Dexian Dong, Dezhao Chen, Rongxiu Li (2009).Structuraland biological characterizations of a novel acutobin-like enzyme isolated from the snake venom of Deinagkistrodon acutus.Biotechnology and Applied Biochemistry,  53, 123-131.

 

39.Wei Zhu, Wei Zhang, Liu-Yin Fan, Jing Shao, Si Li, Jin-Lian Chen, Cheng-Xi Cao (2009).Study on mechanism of stacking of zwitterion in highly saline biologic sample by transient moving reaction boundary created by formic buffer and conjugate base in capillary electrophoresis.Talanta, 78, 1194-1200.

 

40.Xiu-Juan Wu, Jian-Liang Pan, Xiang-Long Liu, Jing Tan, Dao-Tang Li, and Hong Yang (2009).Sulfate - Reducing Bacteria in Leachate-Polluted Aquifers along the Shore of the East China Sea.Canadian Journal of Microbiology, 55(7):818 -828.

 

41.Chen S, Mao X, Shen Y, Zhou Y, Li J, Wang L, Tao X, Yang L, Wang Y, Zhou X, Deng Z, Wei D (2009).Tailoring the P450 monooxygenase gene for FR-008/candicidin biosynthesis.Applied & Environmental Micro biology.75(6):1778-81.

 

42.Huang JF, Xu YQ, Zhang HY, Li YQ, Huang XQ, Ren B, Zhang XH. (2009).Temperature-Dependent Expression of phzM with its Regulatory Genes lasI and ptsP in Rhizosphere Isolated Pseudomonas sp. Strain M18.Appl Environ Microbiol,75(20):6568-6580.

 

43.Liu T, Cane DE, Deng Z (2009).The enzymology of polyether biosynthesis.Methods in Enzymology.  459:187-214.

 

44.Wei Zhang, Zhiyong Li,Xiaoling Miao,Fengli Zhang (2009).The screening of antimicrobial bacteria with diverse novel nonri bosomal peptide synthetase (NRPS) genes from South China Sea .Marine Biotechnology,11:346-355.

 

45.Wenjin Ye, Xianglong Liu, Shengqin Lin, Jing Tan , Jianliang Pan, Daotang Li, Hong Yang (2009).The vertical distribution of bacterial and archaeal communities in the water and sediment of Lake Taihu.FEMS Microbiology Ecology,70:263-276.

 

46.Wei Zhang, Jie Jin, Liu-Yin Fan, Si Li, Jing Shao, Cheng-Xi Cao (2009).Theoretical and experimental investigations on relationship between Kohlrausch regulating function/inequality and moving reaction boundary in electrophoresis.J Sep Sci,  32, 2123-2131.

 

47.Dexian Dong, Jie Sun, Feiyun Huang, Rongxiu Li (2009).Using trifluoroacetic acid to pretreat lignocellulosic biomass.Biomass and Bioenergy, 33, 1719–1723.

 

48.Dexian Dong, Junyan Li, Yuquan Xu, Rongxiu Li (2009).Utilizing RNA/DNA hybridization to directly quantify mRNA levels in microbial fermentation samples.Journal of Microbiological Methods,   79, 205-210.

 

49.Li J C, Feng J H, Li Q, Ma C Q, Yu B, Gao C, Wu G, Xu P (2009).Both FMNH2 and FADH2 can be utilized by the dibenzothiophene monooxygenase from a desulfurizing bacterium Mycobacterium goodii X7B.Bioresour Technol ,100(9): 2594-2599.

 

50.Xie N Z, Tang H Z, Feng J H, Xu P (2009).Characterization of benzoate degradation by newly isolated bacterium Pseudomonas sp XP-M2.Biochem Eng J ,46(1): 79-82.

 

51.X Zhou, JJ Zhong (2009).Effect of initial ammonium concentration on taxoid production and biosynthesis genes expression profile in suspension cultures of Taxus chinensis cells.Engineering in Life Science, 9(3): 261-266.

 

52.Ma C Q, Wang A L, Qin J Y, Li L X, Ai X L, Jiang T Y, Tang H Z, Xu P (2009).Enhanced 2,3-butanediol production by Klebsiella pneumoniae SDM.Appl Microbiol Biotechnol  , 82(1): 49-57.

 

53.Xiao Z J, Lu J R, Ma C Q, Xu P (2009).Formation and identification of trimethylimidazole during tetramethylpyrazine production from glucose by Bacillus strains.Biotechnol Lett ,31(9): 1421-1425.

 

54.Nian-Hong Chen, Jian-Jiang Zhong (2009).Ganoderic acid Me induces G1 arrest in wild-type p53 human tumor cells while G1/S transition arrest in p53-null cells.Process Biochemistry,44: 928–933.

 

55.Wang X, Dou P P, Zhao P, Zhao C M, Ding Y, Xu P (2009).Immobilization of Lipases onto Magnetic Fe3O4 Nanoparticles for Application in Biodiesel Production.ChemSusChem,2(10): 947 -950.

 

56.Li Q G, Wang X Y, Yin G B, Gai Z H, Tang H Z, Ma C Q, Deng Z X, Xu P (2009).New metabolites in dibenzofuran cometabolic degradation by a biphenyl-cultivated Pseudomonas putida strain B6-2.Environ Sci Technol ,43(22): 8635-8642.

 

57.Wu Z, Bai L, Wang M, Shen YM (2009).Structure-antibacterial relationship of nigericin derivatives.Chemistry of Natural Compounds, 45(3): 333-7.

 

58.Lu JS, Huang XQ, Zhang MY, Li SN, Jiang HX, Xu YQ. (2009).The distinct quorum sensing hierarchy of las and rhl in Pseudomonas sp. M18.Curr Microbiol.59(6):621-627.

 

59.Wu Z, Bai L, Wang M, Shen YM (2009).Structure-antibacterial relationship of nigericin derivatives.Chemistry of Natural Compounds, 45(3): 333-7.

 

60.Ya-Jie Tang, Xiao-Ling Xu, Jian-Jiang Zhong (2009).A novel biotransformation process of 4'-demethylepipodophyllotoxin to 4'-demethylepipodophyllic acid by Bacillus fusiformis CICC 20463.Process Biochemistry,44: 572–577.

 

61.F. Shaikh, R.P. Spence, K. Levi, H.Y. Ou, Z. Deng, K.J. Towner and K. Rajakumar (2009).ATPase genes of diverse multidrug-resistant Acinetobacter baumannii isolates frequently harbour integrated DNA.Journal of Antimicrobial Chemo therapy. 63(2), 260-4.

 

62.Jian-Hui Xiao, Dai-Min Xiao, Zhong-Hua Sun, Qing Xiong, Zong-Qi Liang and Jian-Jiang Zhong (2009).Chemical compositions and antimicrobial property of three edible and medicinal Cordyceps species.Journal of Food, Agriculture & Environment 7 , (3&4): 91-100.

 

63.Qiao-Ning Liu, Rui-Sang Liu, Yi-Hua, Dong-Sheng Li, JianJiang Zhong, Yaie Tang (2009).Fed-batch fermentation of Tuber melanosporum for the hyperproduction of mycelia and bioactive Tuber polysaccharides.Bioresource Technology ,100: 3644-3649.

 

64.Ya-Jie Tang, Guan Wang, Yuan-Yuan Li, Jian-Jiang Zhong (2009).Fermentation condition outweighed truffle species in affecting volatile organic compounds analyzed by chromatographic fingerprint system.Analytica Chimica Acta, 647 (1): 40-45.

 

65.KY Paek, HN Murthy, EJ Hahn, JJ Zhong (2009).Large Scale Culture of Ginseng Adventitious Roots for Production of Ginsenosides.Advances in Biochemical Enginee ring / Biotechnology, 113: 151-176.

 

66.Ya-Jie Tang, Yan Li, Jian-Jiang Zhong (2009).Novel biotransformation process of podophyllotoxin to produce podophyllic acid and picropodophyllotoxin by Pseudomonas aeruginosa CCTCC AB93066, Part I: Process Development.Bioprocess and Biosystems Engineering , 32: 663–671.

 

67.Jian-Hui Xiao, Dai-Min Xiao, Qing Xiong, Zong-Qi Liang and Jian-Jiang Zhong (2009).Optimum extraction and high-throughput detection of cordycepic acid from medicinal macrofungi Cordyceps jiangxiensis, Cordyceps taii and Cordyceps gunnii.Journal of Food, Agriculture & Environment 7 , (3&4): 328-333.

 

68.YJ Tang, W Zhang, JJ Zhong (2009).Performance analyses of a pH-shift and DOT-shift integrated fed-batch fermentation process for the production of ganoderic acid and Ganoderma polysaccharides by medicinal mushroom Ganoderma lucidum.Bioresource Technology,100: 1852–1859.

 

69.Li R, Xie Z, Tian Y, Yang H, Chen W, You D, Liu G, Deng Z, Tan H (2009).polR, a  pathway-specific transcriptional regulatory gene, positively controls polyoxin biosynthesis in Streptomyces cacaoi subsp. asoensis.Microbiology-SGM. 155(Pt 6): 1819-31.

 

70.Mao X, Wang F, Zhang J, Chen S, Deng Z, Shen Y, Wei D (2009).The pH shift and precursor feeding strategy in a low-toxicity FR-008/candicidin derivative CS103 fermentation bioprocess by a mutant of Streptomyces sp FR-008.Appl Biochem Biotechnol, 159(3):673-86.

 

71.F. Wang, X. Xiao, H.Y. Ou, Y. Gai, F. Wang (2009).The role and regulation of fatty acid biosynthesis in Shewanella piezotolerans WP3 response to different temperatures and pressures..Journal of Bacteriology.  191(8):2574-84.

 

72.Wu JY, Su W, Jin YX, Shi Y, Li CE, Zhong WW, Zhang XH, Zhang ZL, Xia ZW (2009).Targeted suppression of heme oxygenase-1 by small interference RNAs inhibits the production of bilirubin in neonatal rat with hyperbilirubinemia.BMC Molecular Biology,  10.

 

73.Zhou WP, Zhong WW, Zhang, XH, Ding JP, Xia ZW (2009).Comparison of the crystal structure and function to wild-type and His25Ala mutant human heme oxygenase-1.Intern J of Molecular Medicine,  23: 379-387.

 

74.Zhao, YL, Meot-Ner, M, Gonzalez, C (2009).Ionic Hydrogen Bond Networks and Ion Solvation 1 An Efficient Monte Carlo / Quantum Mechanical Method for Structural Search  and Energy Computations: Ammonium/Water.J Phys Chem A, 113(12), 2967-2974.

 

75.Li M, Zhou H, Hua W, Wang B, Wang S, Zhao G, Li L, Zhao L, Pang X (2009).Molecular diversity of Bacteroides spp in human fecal microbiota as determined by group-specific 16S rRNA gene clone library analysis.Syst Appl Microbiol 32 (3) :193-200.

 

76.Zhang X, Ma X, Wang N, Yao T (2009).New subgroup of Bacteroidetes and diverse microorganisms in Tibetan plateau glacial ice provide a biological record of environmental conditions.FEMS Microb Ecol,  67:21-29.

 

77.Penoni, A, Palmisano, G, Zhao, YL, Houk, K N, Volkman, J, Nicholas, K M (2009).On the Mechanism of Nitrosoarene-Alkyne Cycloaddition.J Am Soc Chem ,131(2), 653-661,2009.

 

78.Wu JY, Su W, Jin YX, Shi Y, Li CE, Zhong WW, Zhang XH, Zhang ZL, Xia ZW (2009).Targeted suppression of heme oxygenase-1 by small interference RNAs inhibits the production of bilirubin in neonatal rat with hyperbilirubinemia.BMC Molecular Biology,  10.

 

79.Zhang M, Zhang M, Zhang C, Du H, Wei G, Pang X, Zhou H, Liu B, Zhao L (2009).Pattern extraction of structural responses of gut microbiota to rotavirus infection via multivariate statistical analysis of clone library data.FEMS Microbiol Ecol  Nov, 70(2):21-9.

 

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