微生物代谢国家重点实验室2011-2015年发表论文目录
序号 论文 作  者 刊物名称、卷期页码
1 Synthesis and characteristics of a novel artificial hapten using the copper mercaptide of penicillenic acid from penicillin G for immunoassay of heavy metal ions. Xu W, Xie P, Fan L, Cao C, Xi T, Zhou P Sci China Life Sci, 2011, 54(9):813-821
2 One-pot bio-synthesis: N-acetyl-d-neuraminic acid production by a powerful engineered whole-cell catalyst. Tao F, Zhang Y, Ma C, Xu P Sci Rep,2011,1:142
3 Switch of substrate specificity of hyperthermophilic acylaminoacyl peptidase by combination of protein and solvent engineering. Liu C, Yang G, Wu L, Tian G, Zhang Z, Feng Y Protein Cell,2011, 6: 497-506
4 A fluorescence-based method for the characterization of amino loading density on the flat surface of functionalized glass tubes Ye L, Ma G, Zhong C, Yan Y, Pan J, Ma G and Li R Anal Meth,2011, 3(11):2524–2528
5 Isolation and characterization of a novel Ganoderm a lucidum gene that differentially expressed between shaking culture and liquid static culture. Xu JW, Zhao W, Zhong JJ Genes Genom, 2011, 33(6):645-651
6 Purification, crystallization, and preliminary X-ray analysis of DndE protein from Salmonella enterica serovar Cerro87, which is involved in DNA phosphorothioation. Chen FK, Lin K, Zhang ZY, Chen LY, Shi XS, Cao CY, Wang ZJ, Liang JD, Deng ZX, Wu G Acta Crystallogr Sect F Struct Biol Cryst Commun,2011, 67(11):1440-42
7 Influence of the N-terminal peptide on the cocrystallization of a thermophilic endo-β-1,4-glucanase with polysaccharide substrates Zheng B, Yang W, Wang Y, Lou Z, Feng Y Acta Crystallogr Sect F Struct Biol Cryst Commun,2011, 67(10):1218-20
8 The first-principle studies of the crystal phase transitions: Fd3m-MgAl2O4→F4-3m-MgAl2O4 Zhang L, Ji GF, Zhao F, Meng CM, Wei D Physica B,2011, 406(3):335-338
9 Accurate localization and excision of genomic islands in four strains of Pseudomonas aeruginosa and Pseudomonas fluorescens Song L, Zhang XH Chinese Sci Bull,2011, 56(10):987-995
10 Experimental study on the determination and degradation of pyoluteorin in soil via CE with Soxhlet's Extraction and field-amplified sample stacking. Dong H, Gao B, Wang W, Fan LY, Xu YQ, Zhang XH, Cao CX Chromatographia,2011, 73(5-6):609-12
11 Mesoscopic simulation of aggregate behaviour of fluoropolymers in the TATB-based PBX Zhang Y, Ji G, Zhao F, Gong Z, Wei D, Chen L, Li W Mol Simulat,2011, 37(3):237-242
12 Molecular characterization of cold-inducible beta-galactosidase from Arthrobacter sp. ON14 isolated from Antarctica. Xu K, Tang X, Gai Y, Mehmood M, Xiao X, Wang F J Microbiol Biotechn,2011, 21(3):236-242
13 In situ biodiesel production from fast-growing and high oil content Chlorella pyrenoidosa in rice straw hydrolysate. Li P, Miao X, Li R, Zhong J J Biomed Biotechnol,2011, 2011:141207
14 Streptomycindole, an indole alkaloid, from a marine Streptomyces sp. DA22 associated with South China Sea sponge Craniella australiensis Huang XL, GaoY, Xue DQ, Peng CS, Zhang FL, Li ZY, Guo YW Helv Chim Acta,2011,94:1838-1842
15 Mutation probability of cytochrome P450 based on a genetic algorithm and support vector machine. Yao Y, Zhang T, Xiong Y, Li L, Huo J, Wei DQ Biotechnol J,2011, 6(11):1367-76
16 Interactions of biocidal guanidine hydrochloride polymer analogs with model membranes: a comparative biophysical study. Zhou Z, Zheng A, Zhong J Acta Bioch Bioph Sin,2011, 43(9):729-737
17 New cytotoxic metabolites from a deep-sea-derived fungus, Phialocephala sp., strain FL30r. Li DH, Cai SX, Zhu TJ, Wang FP, Xiao X, Gu QQ Chem Biodivers,2011, 8(5):895-901
18 Molecular characterization of the modular chitin binding protein Cbp50 from Bacillus thuringiensis serovar konkukian. Mehmood MA, Xiao X, Hafeez F Y, Gai Y, Wang FP Anton Leeuw Int J G,2011, 100(3):445-453
19 Stratification of archaeal communities in shallow sediments of the Pearl River Estuary, Southern China. Jiang L, Zheng Y, Chen J, Xiao X, Wang F Anton Leeuw Int J G,2011, 99(4):739-751
20 Development of a fluorophore-ribosomal DNA restriction typing method for monitoring structural shifts of microbial communities. Wang T, Zhang X, Zhang M, Wang L, Zhao L Arch Microbiol,2011, 193(5):341–350
21 Free energy calculations and binding analysis of two potential anti- influenza drugs with Polymerase basic protein-2 (PB2). Lv HM, Guo XL, Gu RX, Wei DQ Protein Peptide Lett,2011, 18(10):1002-1009
22 Predicting protein-ligand binding sites based on an improved geometric algorithm. He J, Wei DQ, Wang JF, Chou KC Protein Peptide Lett,2011, 18(10):997-1001
23 Streptomyces indicus sp. nov., an actinomycete isolated from deep-sea sediment. Luo Y, Xiao J, Wang Y, Xu J, Xie S, Xu J Int J Syst Evol Micr, 2011, 61(11):2712-2716
24 Vitreous and serum levels of transthyretin (TTR) in high myopia patients are correlated with ocular pathologies. Shao J, Xin Y, Li R, Fan Y Clin Biochem,2011, 44(8-9):681-685
25 Biological active metabolite cyclo (L-Trp-L-Phe) produced by South China Sea sponge Holoxea sp. associated fungus Aspergillus versicolor strain TS08. Chu D, Peng C, Ding B, Liu F, Zhang F, Lin H, Li Z Bioproc Biosyst Eng,2011, 34(2):223-229
26 The first-principles calculations for the elastic properties of Zr2Al under compression Yuan X, Wei D, Chen X, Zhang Q, Gong Z J Alloy Compd,2011, 509(3):769–774
27 Expansion of the known Klebsiella pneumoniae species gene pool by characterization of novel alien DNA islands integrated into tmRNA gene sites Zhang J, Jurriaan van Aartsen J, Jiang X, Shao Y, Tai C, He X, Tan Z, Deng Z, Jia S, Rajakumar K, Ou HY J Microbiol Meth,2011,84:283-289
28 Extensive in vitro activity of guanidine hydrochloride polymer analogs against antibiotics-resistant clinically isolated strains. Zhou ZX, Wei DF, Guan Y, Zheng A, Zhong JJ Mat Sci Eng C-Mater,2011, 31(8):1836-1843
29 Revealing the drug-resistant mechanism for diarylpyrimidine analogue inhibitors of HIV-1 reverse transcriptase Zhang H, Qin F, Ye W, Li Z, Ma S, Xia Y, Jiang Y, Zhu J, Li Y, Zhang J, Chen HF Chem Biol Drug Des,2011, 78(3):427-437
30 Role of dipole elongation in orientationally ordered liquids Wei DQ, Gao L, Zhang J, Yan LW, Hu JH, Chen L, Gong ZZ, Guo YX, Han Y Phys Rev E, 2011, 83(6):061703-061707
31 Isolation and purification of a modified phenazine, griseoluteic acid, produced by Streptomyces griseoluteus P510 Wang Y, Luo Q, Zhang X, Wang W Res Microbiol, 2011, 162(3):311-319
32 Slow-release formulation of a new biological pesticide, pyoluteorin, with mesoporous silica. Chen J, Wang W, Xu Y, Zhang X J Arg Food Chem,2011, 59 (1):307-311
33 In silico prediction of cytochrome P450-mediated drug metabolism. Zhang T, Chen Q, Li L, Liu LA, Wei DQ Comb Chem High T Scr,2011, 14(5):388-95
34 Crystal structure of the armadillo repeat domain of adenomatous polyposis coli which reveals its inherent flexibility. Zhang Z, Lin K, Gao L, Chen L, Shi X, Wu G Biochem Bioph Res Co,2011, 412(4):732-736
35 Design and synthesis of affinity ligands and relation of their structure with adsorption of proteins. Ye L, Xu A, Cheng C, Zhang L, Huo C, Huang F, Xu H, Li R J Sep Sci,2011, 34(22):3145–3150
36 Mid-scale free-flow electrophoresis with gravity-induced uniform flow of background buffer in chamber for the separation of cells and proteins. Dong YC, Shao J, Yin XY, Fan LY, Cao CX J Sep Sci,2011, 34(14):1683-1691
37 Effects of Ganoderic acid Me on inhibiting multidrug resistance and inducing apoptosis in multidrug resistant colon cancer cells. Jiang ZJ, Jin TT, Gao F, Liu JW, Zhong JJ, Zhao H Process Biochem,2011, 46(6):1307–1314
38 Bacillamide C production by the optimized cultivation of the Bacillus atrophaeus strain C89 associated with the South China Sea sponge Dysidea avara. Jin LJ, Ma W, Peng CS, Yin Y, Xu BL, Zhang FL, Guo YW, Li ZY Process Biochem,2011, 46(5):1153-1159
39 Highly efficient ring-opening polymerization of <epsilon>–caprolactone catalyzed by a recombinant Escherichia coli whole-cell biocatalyst. Li QS, Li GQ, Ma FQ, Zhang ZM, Zheng BS, Feng Y Process Biochem,2011, 46(2):477-481
40 Scale-up study on the fed-batch fermentation of Ganoderma lucidum for the hyperproduction of ganoderic acid and ganoderma polysaccharides. Tang YJ, Zhang W, Liu RS, Zhu LW, Zhong JJ Process Biochem,2011, 46(1):404–408
41 Ring-opening polymerization of <epsilon>-caprolactone catalyzed by a novel thermophilic lipase from Fervidobacterium nodosum, Li QS, Li GQ, Yu SS, Zhang ZM, Ma FQ, Feng Y Process Biochem,2011, 46(1):253-257
42 Ganoderic acid Me induces apoptosis through mitochondria dysfunctions in human colon carcinoma cells. Zhou L, Shi P, Chen NH, Zhong JJ Process Biochem,2011, 46(1):219–225
43 p53 is important for the anti-invasion of ganoderic acid T in human carcinoma cells. Chen NH, Zhong JJ Phytomedicine,2011, 18(8-9):719–725
44 Ganoderic acid Mf and S induce mitochondria mediated apoptosis in human cervical carcinoma HeLa cells. Liu RM, Zhong JJ Phytomedicine,2011, 18(5):349–355
45 Kinetic study of 7-O-ethylganoderic acid O stability and its importance in the preparative isolation. Wang JL, Li YB, Qin HL, Zhong JJ Biochem Eng J,2011, 53(2):182–186
46 Phylogenetically diverse cultivable fungal community and polyketide synthase (PKS), non-ribosomal peptide synthase (NRPS) genes associated with the South China Sea sponges. Zhou K, Zhang X, Zhang F, Li Z Microbiol Ecol,2011, 62(3):644-654
47 Distribution and abundance of archaea in South China Sea sponge Holoxea sp. and the presence of ammonia-oxidizing archaea in sponge cells. Liu F, Han M, Zhang F, Zhang B, Li Z Evid Based Complement Alternat Med,2011, 2011:723696
48 Recovery and phylogenetic diversity of culturable fungi associated with marine sponges Clathrina luteoculcitella and Holoxea sp. in the South China Sea. Ding, B, Yin, Y, Zhang, FL, Li, ZY Mar Biotechnol,2011, 13(4):713-721
49 Genetic characterization of enzymes involved in the priming steps of oxytetracycline biosynthesis in Streptomyces rimosus Wang P, Gao X, Chooi YH, Deng Z, Tang Y Microbiol-SGM,2011, 157(8):2401-2409
50 Enrichment of a microbial community performing anaerobic oxidation of methane in a continuous high-pressure bioreactor Zhang Y, Maignien L, Zhao X, Wang F, Boon N BMC Microbiol,2011, 11:137
51 Biomimetic affinity purification of Candida antarctica lipase B Yao H, Zhang T, Xue H, Tang K, Li R J Chromatogr B,2011, 879(32):3896-900 
52 Novel positive allosteric modulators of the human α7 nicotinic acetylcholine receptor. Arias HR, Gu RX, Feuerbach D, Guo BB, Ye Y, Wei DQ Biochemistry-US, 2011, 50(23):5263-5278
53 Quantitative investigation of non-hydrolytic disruptive activity on crystalline cellulose and application to recombinant swollenin. Wang Y, Tang R, Tao J, Gao G, Wang X, Mu Y, Feng Y Appl Microbiol Biot,2011, 91(5):1353-1363
54 A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis. Zhang X, Yue S, Zhong H, Hua W, Chen R, Cao Y, and Zhao L Appl Microbiol Biot,2011, 91(2):425-434
55 Intracellular salicylic acid is involved in signal cascade regulating low ammonium induced taxoid biosynthesis in suspension cultures of Taxus chinensis. Zhou X, Zhong JJ Appl Microbiol Biot,2011, 90(3):1027-1036
56 GGDEF proteins YeaI, YedQ, and YfiN reduce early biofilm formation and swimming motility in Escherichia coli. Sanchez-Torres V, Hu H, Wood TK Appl Microbiol Biot,2011, 90(2):651-658
57 Fervidobacterium changbaicum Lip1: identification, cloning, and characterization of the thermophilic lipase as a new member of bacterial lipase family V. Cai J, Xie Y, Song B, Wang Y, Zhang Z, Feng Y Appl Microbiol Biot,2011, 89(5):1463-73
58 Enhanced production of 2-hydroxyphenazine in Pseudomonas chlororaphis GP72. Huang L, Chen MM, Wang W, Hu HB, Peng HS, Xu YQ, Zhang XH Appl Microbiol Biot,2011, 89(1):169-177
59 Iron reduction and magnetite biomineralization mediated by a deep-sea iron-reducing bacterium Shewanella piezotolerans WP3. Wu WF,Li B, Hu J, Li JH, Wang F, Pan YX J Geophys Res, 2011, 116(G4)
60 Nucleotidylation of unsaturated carbasugar in validamycin biosynthesis Yang J, Xu H, Zhang Y, Bai L, Deng Z, Mahmud T Org Biomol Chem,2011, 9(2):438-49 
61 Re-assemblable quasi-chip free-flow electrophoresis with simple heating dispersion for rapid micropreparation of trypsin in crude porcine pancreatin. Geng JZ, Shao J, Yang JH, Pang B, Cao CX, Fan LY Electrophoresis, 2011, 32(22):3248-3256
62 Equivalence-point electromigration acid-base titration via moving neutralization boundary electrophoresis. Yang Q, Fan LY, Huang SS, Zhang W, Cao CX Electrophoresis, 2011, 32(9):1015-1024
63 Design and construction of improved new vectors for Zymomonas mobilis recombinants. Dong HW, Bao J, Ryu DD, Zhong JJ Biotechnol Bioeng,2011, 108(7):1616-27
64 Quantitative influence of endogenous salicylic acid level on taxuyunnanine C biosynthesis in suspension cultures of Taxus chinensis. Zhou X, Zhong JJ Biotechnol Bioeng,2011, 108(1):216-221
65 Comparative study on sample stacking by moving reaction boundary formed with weak acid and weak or strong alkali in capillary electrophoresis: I. Theory. Cao C, Zhang W, Fan L, Shao J, Li S Talanta,2011, 84(3):651-658
66 Comparative study on sample stacking by moving reaction boundary formed with weak acid and weak or strong base in capillary electrophoresis: II. Experiments. Zhang W, Fan L, Shao J, Li S, Li S, Cao C Talanta,2011, 84(2):547-557
67 Genome sequence of Sphingomonas elodea ATCC 31461, a highly productive industrial strain of gellan gum. Gai Z, Wang X, Zhang X, Su F, Wang X, Tang H, Tai C, Tao F, Ma C, Xu P J Bacteriol,2011, 193(24):7015-7016
68 Genome sequence of Pseudomonas putida Idaho, a unique organic-solvent-tolerant bacterium. Tao F, Tang H, Gai Z, Su F, Wang X, He X, Xu P J Bacteriol,2011, 193(24):7011-7012
69 Genome sequence of Pseudomonas putida strain B6-2, a superdegrader of polycyclic aromatic hydrocarbons and dioxin-like compounds. Tang H, Yu H, Li Q, Wang X, Gai Z, Yin G, Su F, Tao F, Ma C, Xu P J Bacteriol,2011, 193(23):6789-6790
70 Genome sequence of Rhodococcus erythropolis XP, a biodesulfurizing bacterium with industrial potential. Tao F, Zhao P, Li Q, Su F, Yu B, Ma C, Tang H, Tai C, Wu G, Xu P J Bacteriol,2011, 193(22):6422-6423
71 Genome sequence of Serinicoccus profundi, a novel actinomycete isolated from deep-sea sediment Xiao J, Luo Y, Xu J. J Bacteriol,2011, 193(22): 6413
72 Genome sequence of Sphingobium yanoikuyae XLDN2-5, an efficient carbazole-degrading strain. Gai Z, Wang X, Tang H, Tai C, Tao F, Wu G, Xu P J Bacteriol,2011, 193(22):6404-6405
73 Genome sequence of Bacillus pumilus S-1, an efficient isoeugenol-utilizing producer for natural vanillin. Su F, Hua D, Zhang Z, Wang X, Tang H, Tao F, Tai C, Wu Q, Wu G, Xu P J Bacteriol, 2011, 193(22):6400-6401
74 Genome sequence of the thermophilic strain Bacillus coagulans XZL4, an efficient pentose-utilizing producer of chemicals. Su F, Xu K, Zhao B, Tai C, Tao F, Tang H, Xu P J Bacteriol,2011, 193(22):6398-6399
75 Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16. Yu H, Tang H, Wang L, Yao Y, Wu G, Xu P J Bacteriol,2011, 193(19):5541-5542
76 Genome sequence of the thermophilic strain Bacillus coagulans 2-6, an efficient producer of high-optical-purity L-lactic acid. Su F, Yu B, Sun J, Ou HY, Zhao B, Wang L, Qin J, Tang H, Tao F, Jarek M, Scharfe M, Ma C, Ma Y, Xu P J Bacteriol,2011, 193(17):4563-4564
77 Complete genome sequence of the obligate piezophilic hyperthermophilic archaeon Pyrococcus yayanosii CH1. Xu J, Liu LP, Xu MJ, Philippe O, Wang FP, Mohamed J, Xiao X J Bacteriol,2011, 193(16):4297-4298
78 Chemoenzymatic synthesis of N-acetyl-D-neuraminic acid from N-acetyl-D-glucosamine by using the spore surface-displayed N-acetyl-D-neuraminic acid aldolase. Gao C, Xu X, Zhang X, Che B, Ma C, Qiu J, Tao F, Xu P Appl Environ Microb,2011, 77(19):7080-3
79 Novel antiphytopathogenic compound 2-heptyl-5-hexylfuran-3-carboxylic acid, produced by newly isolated Pseudomonas sp. strain SJT25. Wang XY, Xu YQ, Lin SJ, Liu ZZ, Zhong JJ Appl Environ Microb,2011, 77(17):6253-57
80 Long-range effects of a peripheral mutation on the enzymatic activity of cytochrome P450 1A2. Zhang T, Liu L, Lewis D and Wei D J Chem Inf Model,2011, 51(6):1336-46 
81 Cloning and functional analysis of the naphthomycin biosynthetic gene cluster in Streptomyces sp. CS Wu Y, Kang Q, Shen Y, Su W, Bai L Mol Biosyst,2011, 7(78) :2459-69
82 Stacking and determination of phenazine-1-carboxylic acid with low pKa in soil via moving reaction boundary formed by alkaline and double acidic buffers in capillary electrophoresis. Sun C, Yang XD, Fan LY, Zhang W, Xu YQ, Cao CX Anal Bioanal Chem,2011, 399(10):3441-50
83 Advances in human cytochrome P450 and personalized medicine. Chen Q, Zhang T, Wang J We D Curr Drug Metab,2011, 12(5):436-444
84 N-methylation of the amide bond by methyl transferase asm10 in ansamitocin biosynthesis Wu Y, Kang Q, Shang G, Spiteller P, Carroll B, Yu TW, Su W, Bai L, Floss HG Chembiochem,2011, 12(11):1759-66
85 Xanthomonas campestris diffusible factor is 3-hydroxybenzoic acid and associated with xanthomonadin biosynthesis, cell viability, antioxidant activity and systemic invasion. He YW, Wu J, Zhou L, Yang F, He YQ, Jiang BL, Bai L, Xu Y, Deng Z, Tang JL, Zhang LH Mol Plant Microbe Interact,2011, 24(8):948-57
86 Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris. Zhou L, Vorholter FJ, He YQ, Jiang BL, Tang JL, Xu Y, Puhler A, He YW BMC Genomics,2011, 12(1):359
87 Genomic analysis and temperature-dependent transcriptome profiles of the rhizosphere originating strain Pseudomonas aeruginosa M18. Wu DQ, Ye J, Ou HY, Wei X, Huang X, He YW, Xu Y BMC Genomics,2011, 12:438
88 Temporal variability of cyanobacterial populations in the water and sediment samples of Lake Taihu as determined by DGGE and real-time PCR. Ye W, Tan J, Liu X, Lin S, Pan J, Li D, Yang H Harmful Algae,2011, 10(5):472–479
89 Enhanced production of ansamitocin P-3 by addition of Mg2+ in fermentation of Actinosynnema pretiosum. Jia Y, Zhong JJ Bioresource Technol,2011, 102(21):10147-50
90 Novel organic solvent-responsive expression vectors for biocatalysis: application for development of an organic solvent-tolerant biodesulfurizing strain. Tao F, Liu Y, Luo Q, Su F, Xu Y, Li F, Yu B, Ma C, Xu P Bioresource Technol,2011, 102(20):9380-7
91 Significance of oxygen supply in production of a novel antibiotic by Pseudomonas sp.SJT25. Xu Y, Zhong JJ Bioresource Technol,2011, 102(19):9167-74
92 Enhanced production of ganoderic acids in static liquid culture of Ganoderma lucidum under nitrogen-limiting conditions. Zhao W, Xu JW, Zhong JJ Bioresource Technol,2011, 102(17):8185-90
93 CO2 biofixation and fatty acid composition of Scenedesmus obliquus and Chlorella pyrenoidosa in response to different CO2 levels. Tang D, Han W, Li P, Miao X, Zhong J Bioresource Technol,2011, 102(3):3071-76
94 Enhanced production of ansamitocin P-3 by addition of isobutanol in fermentation of Actinosynnema pretiosum. Lin J, Bai L, Deng Z, Zhong JJ Bioresource Technol,2011, 102(2):1863-68
95 Enhanced production of validamycin A by H2O2-induced reactive oxygen species in fermentation of Streptomyces hygroscopicus 5008. Wei ZH, Bai L, Deng Z, Zhong JJ Bioresource Technol,2011, 102(2):1783-87
96 Characterization of Family IV UDG from Aeropyrum pernix and its application in hot-start PCR by Family B DNA polymerase Liu XP, Liu JH PLoS One,2011, 6(11):e27248
97 Molecular basis for the recognition of Adenomatous Polyposis Coli by the Discs Large 1 protein. Zhang Z, Li H, Chen L, Lu X, Zhang J, Xu P, Lin K, Wu G PLoS One, 2011, 6(8):e23507
98 Comparison of microbial community compositions of injection and production well samples in a long-term water-flooded petroleum reservoir. Ren HY, Zhang XJ, Song ZY, Rupert W, Gao GJ, Guo SX, Zhao LP PLoS One,2011, 6(8):e23258
99 Regulatory feedback loop of two phz gene clusters through 5'-untranslated regions in Pseudomonas sp. M18. Li Y, Du X, Lu ZJ, Wu D, Zhao Y, Ren B, Huang J, Huang X, Xu Y, Xu Y PLoS One,2011, 6(4):e19413
100 An Allosteric Mechanism Inferred from Molecular Dynamics Simulations on Phospholamban Pentamer in Lipid Membranes Lian P, Wei DQ, Wang JF, Chou KC PLoS One, 2011, 6(4):e18587
101 A novel method to prepare L-arabinose from xylose mother liquor by yeast-mediated biopurification Cheng H, Wang H, Lv J, Jiang M, Lin S, Deng Z Microb Cell Fact,2011, 10:43 
102 Xylitol production from xylose mother liquor: a novel strategy that combines the use of recombinant Bacillus subtilis and Candida maltosa Cheng H, Wang B, Lv J, Jiang M, Lin S, Deng Z Microb Cell Fact,2011, 10:5
103 Characterization of the biosynthesis gene cluster for the pyrrole polyether antibiotic calcimycin (A23187) in Streptomyces chartreusis NRRL3882 Wu Q, Liang J, Lin S, Zhou X, Bai L, Deng Z, Wang Z Antimicrob Agents Ch,2011, 55(3):974-982
104 Structural basis of agonist selectivity for different AChR subtypes: insights from crystal structures, mutation experiments and molecular simulations. Gu R, Zhong Y, Wei D Curr Pharm Design,2011, 17(7):1652-1662
105 A novel NADH-dependent and FAD-containing hydroxylase is crucial for nicotine degradation by Pseudomonas putida Tang H, Yao Y, Zhang D, Meng X, Wang L, Yu H, Ma L, Xu P J Biol Chem,2011, 286(45):39179–39187
106 The N-terminal nucleophile serine of cephalosporin acylase executes the second autoproteolytic cleavage and acylpeptide hydrolysis Yin J, Deng Z, Zhao G, Huang X J Biol Chem,2011, 286(27):24476-24486
107 Identification and characterization of the pyridomycin biosynthetic gene cluster of Streptomyces pyridomyceticus NRRLB-2517 Huang T, Wang Y, Yin J, Du Y, Tao M, Xu J, Chen W, Lin S, Deng Z J Biol Chem,2011, 286(23):20648-20657
108 Bioelectricity enhancement via overexpression of quorum sensing system in Pseudomonas aeruginosa-inoculated microbial fuel cells. Yong YC, Yu YY, Li CM, Zhong JJ, Song H Biosens Bioelectron,2011, 30(1):87-92
109 Over-expression of UDP-glucose pyrophosphorylase increases validamycin A but decreases validoxylamine A production in Streptomyces hygroscopicus var. jinggangensis5008. Zhou X, Wu H, Li Z, Zhou X, Bai L, Deng Z Metab Eng,2011, 13(6):768-776
110 Dual carbamoylations on the polyketide and glycosyl moiety by asm21 result in extended ansamitocinbiosynthesis. Li Y, Zhao P, Kang Q, Ma J, Bai L, Deng Z Chem Biol,2011, 18(12):1571-1580
111 Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers. Wang T, Cai G, Qiu Y, Fei N, Zhang M, Pang X, Jia W, Cai S and Zhao L ISME J,2011, 6(2):320-329
112 Physiological and evolutionary studies of NAP systems in Shewanella piezotolerans WP3 Chen Y, Wang F, Xu J,Mehmood MA, Xiao X ISME J,2011, 5(5):843-855
113 Comparative meta genomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries.  Xie W, Wang FP(co-first author), Guo L, Chen Z, Sievert SM, Meng J, Huang G, Li Y, Yan Q, Shan Wu s, Wang X, Chen S, He G, Xiao X and Xu A ISME J,2011, 5(3):414–426
114 Biotechnological routes based on lactic acid production from biomass Gao C, Ma C, Xu P Biotechnol Adv,2011, 29(6):930–939
115 Recent advances in biotechnological production of 2-phenylethanol Hua D, Xu P Biotechnol Adv,2011, 29(6):654-660
116 ASD: a comprehensive data base of allosteric proteins and modulators. Huang Z, Zhu L, Cao Y, Wu G, Liu X, Chen Y, Wang Q, Shi T, Zhao Y, Wang Y, Li W, Li Y, Chen H, Chen G & Zhang J Nucleic Acids Res, 2011, 39(Suppl 1):D663-D669
117 TADB: a web-based resource for Type2 toxin-antitoxin loci in bacteria and archaea Shao Y, Harrison EM, Bi D, Tai C, He X, Ou HY, Rajakumar K, Deng Z Nucleic Acids Res,2011, 39(Database issue):D606-11
118 Free energy calculations on the two drug binding sites in the M2 proton channel. Gu R, Liu L, Wei D, Du J, Liu L, Liu H J Am Chem Soc,2011, 133(28):10817–10825
119 DNA phosphorothioation is wide spread and quantized in bacterial genomes. Wang L, Chen S, Vergin KL, Giovannoni SJ, Chan SW, DeMott MS, Taghizadeh K, Cordero OX, Cutler M, Alm EJ, Polz MF, Pinhassi J, Deng Z, Dedon PC Proc Natl Acad Sci USA,2011, 108(7):2963-68
120 The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Gu TP, Guo F, Yang H, Wu HP, Xu GF, Liu W, Xie ZG, Shi L, He X, Jin SG, Iqbal K, Shi YG, Deng Z, Szabó PE, Pfeifer GP, Li J, Xu GL Nature,2011, 477(7366):606-610
121 Pressure effects on elastic and thermodynamic properties intermetallic compound of Zr3Al Yuan XL, Wei DQ, Cheng Y, Ji GF, Zhang QM, Gong ZZ Computational Materials Science ,2012, 58:125-130
122 Spatial distribution of prokaryotic symbionts and ammoxidation, denitrifier bacteria in marine sponge Astrosclera willeyana. Yang Z, Li Z Sci Rep,2012, 2:528
123 Genomic analysis of Pseudomonas putida: genes in a genome island are crucial for nicotine degradation Tang H, Yao Y, Wang L, Yu H, Ren Y, Wu G, Xu P Sci Rep,2012, 2:377
124 Efficient extraction and rapid quantitative determination of nucleoside compounds from Cordyceps jiangxiensis, a new cordyceps producing-cordycepin   Xiao JH, Sun ZH, Zhang XJ, Xiong Q, Zhong JJ Lat Am J Pharm,2012, 31(8):1161-9
125 Anti-proliferation and induced mitochondria-mediated apoptosis of ganoderic acid Mk from Ganoderma lucidum mycelia in cervical cancer HeLa cells Liu RM, Li YB, Zhong JJ Lat Am J Pharm,2012, 31(1):43-50
126 Biochemical Characterization of Uracil-DNA Glycosylase from Pyrococcus furiosus. Lin L, Liu Y, Liu X, Liu J Chem Res Chinese U,2012, 28(3):477-482
127 Ultrahigh-throughput enzymatic screening method based on fluorescence-activated cell sorting and its applications Ma FQ, Feng Y, Yang GY Prog Biochem Biophys,2012, 39(4):299-306
128 Cloning and heterologous expression of the manganese superoxide dismutase gene from Lactobacillus casei Lc18. Liu Q , Hang X, Liu X , Tan J , Li D ,Yang H Ann Microbiol,2012, 62(1):129-137c
129 Novel principle and device of acid-base titration via moving neutralization boundary electrophoresis Wang HY, Yang Q, Dong JY, Zhang W, Fan LY, Zhang WB, Cao CX Chinese J Anal Chem,2012, 40(6):968-972
130 Car-Parinello molecular dynamics simulations of thionitroxide and S-nitrosothiol in the gas phase, methanol, and water—A theoretical study of S-nitrosylation. Liang J, Cheng SL, Hou JW, Xu ZH, Zhao YL Sci China Chem,2012, 55(10):2081-2088
131 Insights into fluorometabolite biosynthesis in Streptomyces cattleya DSM46488 through knockout mutants. Zhao C, Li P, Deng Z, Ou HY*, McGlinchey RP, O‘Hagan D* Bioorg Chem,2012, 44:1-7
132 Sensitive determination of barbiturates in biological matrix by capillary electrophoresis using online large-volume sample stacking Fan LY, He T, Tang YY, Zhang W, Song CJ, Zhao X, Zhao XY, Cao CX J Forensic Sci,2012, 24(10):1823-1831
133 Recovery of ganoderic acids from Ganoderma lucidum mycelia by macroporous adsorption resins. Li YB, Wang JL, Zhong JJ Biotechnol Bioproc E,2012, 17(2): 326-336
134 Inactivation of the positive LuxR-type oligomycin biosynthesis regulators OlmRI and OlmRII increases avermectin production in Streptomyces avermitilis Yu Q, Bai LQ, Zhou XF, Deng ZX* Chinese Sci Bull,2012, 57(8):869-76
135 Prediction of the functional consequences of single amino-acid substitution in human cytochrome P450 Wang YF, Zhou Q, Dai H, Zhang T, Wei DQ Mol Simulat,2012, 38(14-15):1297–1307
136 Alteration of substrate specificities of thermophilic α/β hydrolases through domain swapping and domain interface optimization. Zhou X, Wang H, Zhang Y, Gao L, Feng Y Acta Biochim Biophys Sin,2012, 44(12):965-973
137 Effect of the termini of RNase Hs from Chlamydophila pneumoniae on enzymatic biochemical characterization Hou J, Lu Z, Guo X, Liu J. Acta Biochim Biophys Sin,2012, 44(10):831-837
138 The biosynthesis of the polyether antibiotic nanchangmycin is controlled by two pathway-specific transcriptional activators. Yu Q, Du A, Liu T, Deng Z, He X Arch Microbiol,2012, 194(6):415-26
139 Molecular dynamics simulations of CYP2E1. Li J, Wei DQ, Wang JF, Yu ZT, Chou KC Med Chem,2012, 8(2):208-21
140 A pharmacophore model specific to active site of CYP1A2 with a novel molecular modeling explorer and CoMFA Zhang T, Wei DQ, Chou KC Med Chem,2012, 8(2):198-207
141 Characterisation of the bacterial community in expressed prostatic secretions from patients with chronic prostatitis/chronic pelvic pain syndrome and infertile men: a preliminary investigation. Hou DS, Long WM, Shen J, Zhao LP, Pang XY, Xu C Asian J Androl,2012, 14(4):566-73
142 Detection and quantification of cultured marine Alexandrium species by real-time PCR. Zhang F, Li Z World J Microbiol Biotechnol,2012, 28(12):3255-60
143 Structural characteristics of genomic islands associated with GMP synthases as integration hotspot among sequenced microbial genomes. Song L, Pan Y, Chen S, Zhang X Comput Biol Chem,2012, 36:62-70
144 Isolation, identification and characterization of an algicidal bacterium from lake Taihu and preliminary studies on its algicidal compounds. Tian C, Liu X, Tan J, Lin S, Li D, Yang H J Environ Sci,2012, 52(9):2422-9
145 Jiangxienone, a new compound with potent cytotoxicity against tumor cells from traditional Chinese medicinal mushroom Cordyceps jiangxiensis. Xiao JH, Sun ZH, Pan WD, Lü YH, Chen DX, Zhong JJ Chem Biodivers,2012, 9(7):1349-55
146 Operating conditions optimization for (+)-terrein production in a stirred bioreactor by Aspergillus terreus strain PF-26 from marine sponge Phakellia fusca. Xu B, Yin Y, Zhang F, Li Z, Wang L Bioproc Biosyst Eng,2012, 35(9):1651-1655
147 Temperature shift-induced reactive oxygen species enhanced validamycin A production in fermentation of Streptomyces hygroscopicus 5008. Wei ZH, Wu H, Bai L, Deng Z, Zhong JJ Bioproc Biosyst Eng,2012, 35(8):1309-16
148 Impact of nitrogen concentration on validamycin A production and related gene transcription in fermentation of Streptomyces hygroscopicus 5008. Wei ZH, Bai L, Deng Z, Zhong JJ Bioproc Biosyst Eng,2012, 35(7):1201-8
149 A non-restricting and non-methylating Escherichia coli strain for DNA cloning and high-throughput conjugation to Streptomyces coelicolor. Zhou H, Wang Y, Yu Y, Bai T, Chen L, Liu P, Guo H, Zhu C, Tao M, Deng Z Curr Microbiol,2012, 64(2):185-90
150 A novel miniature culture system to screen CO2-sequestering microalgae Wei H, Li C, Miao X, Yu G Energies,2012, 5(11):4372-89
151 Enzyme promiscuity in the hormone-sensitive lipase family of proteins Giuseppe M, Luigia M, Elena P, Yan F, Luigi M Protein Pept Lett,2012, 19(2):144-154
152 SCYPPred: a web-based predictor of SNPs for human cytochrome P450. Li L, Wei DQ, Wang JF, Chou KC Protein Pept Lett,2012, 19(1):57-61
153 Tailoring enzymes acting on carrier protein-tethered substrates in natural product biosynthesis. Lin S, Huang T, Shen B* Methods Enzymol,2012, 516:321-43
154 First-principles study of the structural and elastic properties of Cr2AlX (X=N, C) compounds Cui SX, Wei DQ, Hu HQ, Feng WX, Gong ZZ J Solid State Chem,2012, 191:147-152
155 Polysaccharides from the medicinal mushroom Cordyceps taii show antioxidant and immunoenhancing activities in a D-galactose-induced aging mouse model. Xiao JH, Xiao DM, Chen DX, Xiao Y, Liang ZQ, Zhong JJ Evid Based Complement Alternat Med,2012, 2012:273435
156 Revealing interaction mode between HIV-1 protease and mannitol analog inhibitor Yan GW, Chen Y, Li Y, Chen HF Chem Biol Drug Des,2012, 79(6):916-925
157 Enhancing macrolide production in Streptomyces by coexpressing three heterologous genes. Wang T, Bai L, Zhu D, Lei X, Liu G, Deng Z, You D Enzyme Microb Technol,2012, 50(1):5-9
158 Classification models for predicting cytochrome P450 enzyme-substrate selectivity Zhang T, Dai H, Limin Angela Liu, David F V Lewis, Wei DQ Mol Inform,2012, 31(1):53-6
159 Redesigning the active site of a carboxyl esterase from the archaeon Archaeoglobus fulgidus to improve sensitivity to organophosphorus compounds.  Wang Y, Li B, Han W, Yang G, Zhang Z, Feng Y Process Biochem,2012, 47(12):2219-26
160 A newly isolated strain of Stenotrophomonas sp. hydrolyzes acetamiprid, a synthetic insecticide Tang H, Li J, Hu H, Xu P  Process Biochem,2012, 47(12):1820-25
161 Purification and characterization of a flavin reductase from the biodesulfurizing bacterium Mycobacterium goodii X7B. Li Q, Feng J, Gao C, Li F, Yu C, Meng L, Zhang Z, Ma C, Gu L, Wu G, Xu P Process Biochem,2012, 47(7):1144-49
162 Medium optimization for the high yield production of single (+)-terrein by Aspergillus terreus strain PF26 derived from marine sponge Phakellia fusca. Yin Y, Gao Q, Zhang F, Li Z Process Biochem,2012, 47(5):887-891
163 First total synthesis and determination of the absolute configuration of 1-N-methyl-3-methylamino-[N-butanoicacid-3-(9-methyl-8-propen-7-one)-amide]-benzo[f][1,7]naphthyridine-2-one, a novel benzonaphthyridine alkaloid Tian CS, Jiao XZ, Liu XY, Li RZ, Dong L, Liu XJ, Zhang ZG, Xu J, Xu MJ, Xie P Tetrahedron Lett,2012, 53(36):4892-95
164 Enhancement of cordycepin production in submerged cultures of Cordyceps militaris by addition of ferrous sulfate. Fan DD, Wang W, Zhong JJ Biochem Eng J,2012, 60:30-35
165 Cytotoxic and pro-apoptotic effects of novel ganoderic acid derivatives on human cervical cancer cells in vitro. Liu RM, Li YB, Zhong JJ Eur J Pharmacol,2012, 681(1-3):23-33
166 Extractive fermentation for enhanced production of thailandepsin A from Burkholderia thailandensis E264 using polyaromatic adsorbent resin Diaion HP-20. Liu B, Hui J, Cheng YQ, Zhang X J Ind Microbiol Biotechnol,2012, 57(3):813-819
167 Fate of invading bacteria in soil and survival of transformants after simulated uptake of transgenes, as evaluated by a model system based on lindane degradation. Zhang X, Nesme J, Simonet P, Frostegård A Res Microbiol,2012, 163(3):200-10
168 Isolation and analysis of differentially expressed genes during asexual sporulation in liquid static culture of Ganoderma lucidum by suppression subtractive hybridization. Xu JW, Zhao W, Xu YN, Zhong JJ Mol Biol Rep,2012, 39(4):3603-10
169 Adaptive visual and auditory map alignment in barn owl superior colliculus and its neuromorphic implementation Huo J, Murray A, Wei DQ IEEE T NEURAL NETWOR,2012, 23(9):1486-97
170 A simple monolithic column electroelution for protein recovery from gel electrophoresis. Li GQ, Shao J, Guo CG, Dong JY, Fan LY, Cao CX Anal Biochem,2012, 430(1):24-31
171 Ammonia-containing dimethyl sulfoxide (DMSO): An improved solvent for the dissolution of formazan crystals in the MTT assay. Wang H, Wang F, Tao X, Cheng H Anal Biochem,2012, 421(1):324-6
172 Characterization of a novel chaperone/usher fimbrial operon present on KpGI-5, a methionine tRNA gene-associated genomic island in Klebsiella pneumoniae van Aartsen JJ, Stahlhut SG, Harrison EM, Crosatti M, Ou HY, Krogfelt KA, Struve C, Rajakumar K BMC Microbiol,2012, 12:59
173 Simply enhancing throughput of free-flow electrophoresis via organic-aqueous environment for purification of weak polarity solute of phenazine-1-carboxylic acid in fermentation of Pseudomonas sp. M18 Yang JH, Shao J, Wang HY, Dong JY, Fan LY, Cao CX, Xu YQ Electrophoresis,2012, 33(18):925-2930
174 Quantitative investigation of resolution increase of free-flow electrophoresis via simple interval sample injection and separation Shao J, Fan LY, Cao CX, Huang XQ, Xu YQ Electrophoresis,2012, 33(14):2065-74
175 Enhancing separation of histidine from amino acids via free-flow affinity electrophoresis with gravity-induced uniform hydrodynamic flow. Pang B, Shao J, Zhang J, Geng JZ, Fan LY, Cao CX, Hou JL Electrophoresis,2012, 33(5):856-865
176 Bacterial and archaeal symbionts in the South China Sea sponge Phakellia fusca: community structure, relative abundance, and ammonia-oxidizing populations. Han M, Liu F, Zhang F, Li Z, Lin H Mar Biotechnol,2012, 14(6):701-13
177 Comparative analysis of temperature-dependent transcriptome of Pseudomonas aeruginosa strains from rhizosphere and human habitats. Wu DQ, Li Y, Xu Y. Appl Microbiol Biotechnol,2012, 96(4):1007-19. 
178 Structural analysis and biosynthetic engineering of a solubility-improved and less-hemolytic nystatin-like polyene in Pseudonocardia autotrophica. Lee MJ, Kong D, Han K, Sherman DH, Bai L, Deng Z, Lin S, Kim ES Appl Microbiol Biotechnol,2012, 95(1):157-68
179 Perstraction of intracellular pigments by submerged cultivation of Monascus in nonionic surfactant micelle aqueous solution. Hu Z, Zhang X, Wu Z, Qi H, Wang Z Appl Microbiol Biotechnol,2012, 94(1):81-9
180 A thermostable recombinant transaldolase with high activity over a broad pH range. Huang SY, Zhang YH, Zhong JJ Appl Microbiol Biotechnol,2012, 93(6):2403-102012, 93(6):2403-10
181 Rationally re-designed mutation of NAD-independent l-lactate dehydrogenase: high optical resolution of racemic mandelic acid by the engineered Escherichia coli Jiang T, Gao C, Dou P, Ma C, Kong J, Xu P Microb Cell Fact,2012, 23;11:151
182 Involvement of Ser94 in RNase HIII from Chlamydophila pneumoniae in the recognition of a single ribonucleotide misincorporated into double-stranded DNA. Lu Z, Hou J, Wang Y, Liu J Biochim Biophys Acta.,2012,1824(7):859-865
183 Volatile organic compounds from a Tuber melanosporum fermentation system. Li YY, Wang G, Li HM, Zhong JJ,Tang YJ Food Chem,2012, 135(4):2628-37
231 Transcriptional activation of pyoluteorin operon mediated by the LysR-type regulator PltR bound at a 22 bp lys box in Pseudomonas aeruginosa M18. Li S, Huang X, Wang G, Xu Y PLoS One,2012, 7(6):e39538
232 Carotenoids play a positive role in the degradation of heterocycles by Sphingobium yanoikuyae Liu X, Gai Z, Tao F, Tang H, Xu P PLoS One,2012, 7(6):e39522
233 Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation. Chen F, Zhang Z, Lin K*, Qian T, Zhang Y, You D, He X, Wang Z, Liang J, Deng Z, Wu G PLoS One,2012, 7(5):e36635
234 NAD-independent l-lactate dehydrogenase is required for l-lactate utilization in Pseudomonas stutzeri SDM Gao C, Jiang T, Dou P, Ma C, Li L, Kong J, Xu P PLoS One,2012, 7(5):e36519
235 Insight into the stability of cross-beta amyloid fibril from VEALYL short peptide with molecular dynamics simulation Ye W, Chen Y, Wang W, Yu Q, Li Y, Zhang J, Chen HF PLoS One,2012, 7(5):e36382
236 Structural and functional analysis of validoxylamine A 7’-phosphate synthase ValL involved in validamycin A biosynthesis. Zheng L, Zhou X, Zhang H, Ji X, Li L, Huang L, Bai L, Zhang H PLoS One,2012, 7(2):e32033
237 Recent progress on bioinformatics, functional genomics, and metabolomics research of cytochrome P450 and its impact on drug discovery. Zhang T, Zhao M, Pang Y, Zhang W, Angela Liu L, Wei DQ Curr Top Med Chem,2012, 12(12):1346-55
238 Deletion of TnAbaR23 results in both expected and unexpected antibiogram changes in a multi-drug resistant Acinetobacter baumannii strain Kochar M, Crosatti M, Harrison EM, Rieck B, Chan J, Constantinidou C, Pallen M, Ou HY, Rajakumar K Antimicrob Agents Ch,2012, 56(4):1845-1853
239 Autoinhibitory mechanism for the mutation-induced impaired FGF9 signaling. Wang Y, Wu XL, Wei DQ, Li YX, Wang JF J Chem Info Modeling,2012, 30(1):102-12
240 Chimeric cellulase matrix for investigating intramolecular synergism between non-hydrolytic disruptive functions of carbohydrate-binding modules and catalytic hydrolysis. Wang Y, Tang R, Tao J, Wang X, Zheng B, Feng Y J Biol Chem,2012, 287(35):29568-78
241 Crystal structure of hyperthermophilic endo-β-1, 4-glucanase: implications for catalytic mechanism and thermostability. Zheng B, Yang W, Zhao X, Wang Y, Lou Z, Rao Z, Feng Y J Biol Chem,2012, 287(11):8336-46
242 Alumina nanoparticles-induced effects on wastewater nitrogen and phosphorus removal after short-term and long-term exposure. Chen Y, Su Y, Zheng X, Chen H, Yang H Water Res,2012, 46(14):4379-86
243 Biocatalytic production of (2S,3S)-2,3-butanediol from diacetyl using whole cells of engineered Escherichia coli Li L, Wang Y, Zhang L, Ma C, Wang A, Tao F, Xu P Bioresour Technol,2012, 115:111-116
244 Efficient conversion of 1,2-butanediol to (R)-2-hydroxybutyric acid using whole cells of Gluconobacter oxydans Gao C, Zhang W, Huang Y, Ma C, Xu P Bioresour Technol,2012, 115:75-8
245 Performance and bacterial compositions of aged refuse reactors treating mature landfill leachate. Xie B, Xiong S, Liang S, Hu C, Zhang X, Lu J Bioresour Technol,2012, 103(1):71-7
246 Appendant structure plays an important role in amyloidogenic cystatin dimerization prior to domain swapping Yu Y, Liu X, He J, Zhang M, Li H, Wei D, Song Y J Biomol Struct Dyn,2012, 287(35):29568-78
247 RNase HIII from Chlamydophila pneumoniae can efficiently cleave double-stranded DNA carrying a chimeric ribonucleotide in the presence of manganese. Lu Z, Liang R, Liu X, Hou J, Liu J Mol Microbiol,2012, 83(5):1080-93
248 Prediction and functional analysis of single nucleotide polymorphisms. Li L, Chen Q, Wei DQ Curr Drug Metab,2012, 13(7):1012-23
249 Engineering of an industrial polyoxin producer for the rational production of hybrid peptidyl nucleoside antibiotics. Zhai L, Lin S, Qu D, Hong X, Bai L, Chen W, Deng Z Metab Eng,2012, 14(4):388-93
250 Unveiling the post-PKS redox tailoring steps in biosynthesis of the type II polyketide antitumor antibiotic xantholipin. Zhang W, Wang L, Kong L, Wang T, Chu Y, Deng Z, You D Chem Biol,2012, 19(3):422-32
251 Elucidation of piericidin A1 biosynthetic locus revealed a thioesterase-dependent mechanism of α-pyridone ring formation. Liu Q, Yao F, Chooi Y, Kang Q, Xu W, Li Y, Shao Y, Shi Y, Deng Z, Tang Y, You D Chem Biol,2012, 19(2):243-53
252 Structural resilience of the gut microbiota in adult mice under high-fat dietary perturbations. Zhang C, Zhang M, Pang X, Zhao Y, Wang L, Zhao L ISME J,2012, 6(10):1848-57
253 Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers. Wang T, Cai G, Qiu Y, Fei N, Zhang M, Pang X, Jia W, Cai S, Zhao L ISME J,2012, 6(2):320-9
254 Phosphorothioate DNA as an antioxidant in bacteria. Xie X, Liang J, Pu T, Xu F, Yao F, Yang Y, Zhao YL, You D, Zhou X, Deng Z, Wang Z Nucleic Acids Res,2012, 40(18):9115-24
255 ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Bi D, Xu Z, Harrison EM, Tai C, Wei Y, He X, Jia S, Deng Z, Rajakumar K, Ou HY Nucleic Acids Res,2012, 40 (D1):D621-6
256 Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification. Hu W, Wang C, Liang J, Zhang T, Hu Z, Wang Z, Lan W, Li F, Wu H, Ding J, Wu G, Deng Z, Cao C Cell Res,2012, 22(7):1203-6
257 Structural basis for the recognition of Asef by adenomatous polyposis coli. Zhang Z, Chen L, Gao L, Lin K*, Zhu L, Lu Y, Shi X, Gao Y, Zhou J, Xu P, Zhang J, Wu G Cell Res,2012, 22(2):372-86
258 Impacts of calcium signal transduction on the fermentation production of antitumor ganoderic acids by medicinal mushroom Ganoderma lucidum. Xu YN, Zhong JJ Biotechnol Adv,2012, 30(6):1301-8
259 Production of biomass and useful compounds from adventitious roots of high-value added medicinal plants using bioreactor. Baque MA, Moh SH, Lee EJ, Zhong JJ, Paek KY Biotechnol Adv,2012, 30(6):1255-67
260 Toward steadfast growth of antibiotic research in China: From natural products to engineered biosynthesis Kang Q, Bai L, Deng Z Biotechnol Adv,2012, 30(6):1228-1241
261 Biosynthesis of 3,5-AHBA-derived natural products Kang Q, Shen Y, Bai L Nat Prod Rep,2012, 29(2):243-263
262 Asm8, a specific LAL-type activator of 3-amino-5-hydroxybenzoate biosynthesis in ansamitocin production  Pan WQ, Kang QJ, Wang L, Bai LQ, Deng ZX  Sci China-Life, Sci,2013, 56(7):601-08.
263 Direct biodiesel production from wet microalgae biomass of Chlorella pyrenoidosa through in situ transesterification  Cao HC, Zhang ZL, Wu XW, Miao XL  Biomed Res Int,2013, 930686.
264 Metagenome reveals potential microbial degradation of hydrocarbon coupled with sulfate reduction in an oil-immersed chimney from Guaymas Basin  He Y, Xiao X, Wang F  Frontiers in microbiology,2013, 4:148.
265 Genome sequence of Klebsiella pneumoniae strain ATCC 25955, an oxygen-insensitive producer of 1, 3-propanediol  Wang Y, Tao F, Li C, Li L, Xu P  Genome announcements,2013, 1(4):e00587-13.
266 Genome sequence of Clostridium diolis strain DSM15410, a promising natural producer of 1, 3-propanediol  Wang Y, Tao F, Tang H, Xu P  Genome announcements,2013, 1(4):e00542-13.
267 Genome sequences of two morphologically distinct and thermophilic Bacillus coagulans strains, H-1 and XZL9  Xu K, Su F, Tao F, Li C, Ni J, Xu P  Genome announcements,2013, 1(3).
268 High-performance liquid chromatography analysis of Lomofungin in Streptomyces lomondensis  Li S, Ye QM, Wang W, Hu HB, Zhang XH  J Liq Chromatogr Relat Technol,2013, 36(15):2059-68.
269 The resolution of aglinin A epimers and their NMR assignments  Feng TX, Qu SJ, Tan JJ, Jiang K, Tan CH, Lin SJ  J Asian Nat Prod Res,2013, 15(1):89-93.
270 Improved heterologous erythromycin A production through expression plasmid re-design  Jiang M, Fang L, Pfeifer BA  Biotechnol Prog,2013, 29(4):862-69.
270 Applications of rare event dynamics on the free energy calculations for membrane protein systems  Wang YK, Wei DQ, Gu RX, Fan HM, Ulmschneider J  Can J Chem-Rev Can Chim,2013, 91(9):769-74.
271 Quantitative investigation on the stacking of metal ions induced by another metal ion based on moving substitution boundary electrophoresis  Lou J, Liu Q, Wang HY, Fan LY, Zhang SS, Liang H, Cao CX  Anal Methods,2013, 5(22):6345-51.
271 Enhanced production of (+)-terrein in fed-batch cultivation of Aspergillus terreus strain PF26 with sodium citrate  Yin Y, Xu BL, Li ZY, Zhang BH  World J Microbiol Biotechnol,2013, 29(3):441-46.
272 OxyR, an important oxidative stress regulator to phenazines production and hydrogen peroxide resistance in Pseudomonas chlororaphis GP72  Xie K, Peng HS, Hu HB, Wang W, Zhang XH  Microbiol Res,2013, 168(10):646-53.
272 Evidence from O-18 feeding studies for hydroxyl group donor in the reaction catalyzed by cytidylate hydroxymethylase MilA  Chen C, Gao TL, Zhao G, Deng ZX, Hu SC, Xu HH, He XY  Chin Sci Bull,2013, 58(8):864-68.
273 Biosynthesis and pathway engineering of antifungal polyene macrolides in actinomycetes  Kong DK, Lee MJ, Lin SJ, Kim ES  J Ind Microbiol Biotechnol,2013, 40(6):529-43.
273 Discovering the roles of subsurface microorganisms: Progress and future of deep biosphere investigation  Wang FP, Lu SL, Orcutt BN, Xie W, Chen Y, Xiao X, Edwards KJ  Chin Sci Bull,2013, 58(4-5):456-67.
274 Virtual screening for alpha7 nicotinic acetylcholine receptor for treatment of Alzheimer's disease  Chen SG, Gu RX, Dai H, Wei DQ  J Mol Graph,2013, 39:98-107.
274 Insight into the binding mode between HIV-1 integrase and pyrimidone analogue inhibitors with MD simulation and 3D-QSAR  Ma SY, Ye W, Ji DJ, Chen HF  Med Chem,2013, 9(3):420-33.
275 Enhanced production of (+)-terrein by Aspergillus terreus strain PF26 with epigenetic modifier suberoylanilide hydroxamic acid  Xiao L, Yin Y, Sun W, Zhang FL, Li ZY  Process Biochem,2013, 48(11):1635-39.
275 Expression, purification and biochemical characterization of Methanocaldococcus jannaschii DNA ligase  Wang Y, Xie JJ, Han Z, Liu JH, Liu XP  Protein Expr Purif,2013, 87(2):79-86.
276 Elicitation of ginsenoside biosynthesis in cell cultures of Panax ginseng by vanadate  Huang C, Zhong JJ  Process Biochem,2013, 48(8):1227-34.
276 Exploring the ligand-protein networks in traditional Chinese medicine: current databases, methods, and applications  Zhao MZ, Zhou Q, Ma WH, Wei DQ  Evid-based Complement Altern Med, 2013,806072
277 Phylogenetically diverse denitrifying and ammonia-oxidizing bacteria in corals Alcyonium gracillimum and Tubastraea coccinea  Yang S, Sun W, Zhang FL, Li ZY  Mar Biotechnol,2013, 15(5):540-51.
277 Molecular dynamics simulations of amyloid fibrils: an in silico approach  Ye W, Wang W, Jiang C, Yu QF, Chen HF  Acta Biochim Biophys Sin,2013, 45(6):503-08.
278 A novel thermophilic beta-glucosidase from caldicellulosiruptor bescii: characterization and its synergistic catalysis with other cellulases  Bai AX, Zhao XY, Jin YW, Yang GY, Feng Y  J Mol Catal B-Enzym,2013, 85-86:248-56.
279 Iron(II)-dependent dioxygenase and N-formylamide deformylase catalyze the reactions from 5-hydroxy-2-pyridone to maleamate  Yao YX, Tang HZ, Ren HX, Yu H, Wang LJ, Zhang W, Behrman EJ, Xu P  Sci Rep,2013, 3:3235.
280 Engineering of cofactor regeneration enhances (2S,3S)-2,3-butanediol production from diacetyl  Wang Y, Li LX, Ma CQ, Gao C, Tao F, Xu P  Sci Rep,2013, 3:2643.
281 The role of aromatic L-amino acid decarboxylase in bacillamide C biosynthesis by Bacillus atrophaeus C89  Lei YW, Zhang FL, Chen QH, Lin SJ, Zhao YL, Li ZY  Sci Rep,2013, 3:1753.
282 Characterization of the N-methyltransferase CalM involved in calcimycin biosynthesis by Streptomyces chartreusis NRRL 3882  Wu QL, Gou LX, Lin SJ, Liang JD, Yin J, Zhou XF, Bai LQ, An DR, Deng ZX, Wang ZJ  Biochimie,2013, 95(7):1487-93.
283 Global control of GacA in secondary metabolism, primary metabolism, secretion systems, and motility in the rhizobacterium Pseudomonas aeruginosa M18  Wei X, Huang XQ, Tang LL, Wu DQ, Xu YQ  J Bacteriol,2013, 195(15):3387-400.
284 A simple chip free-flow electrophoresis for monosaccharide sensing via supermolecule interaction of boronic acid functionalized quencher and fluorescent dye  Yin XY, Dong JY, Wang HY, Li S, Fan LY, Cao CX  Electrophoresis,2013, 34(15):2185-92.
285 Fast and selective determination of total protein in milk powder via titration of moving reaction boundary electrophoresis  Guo CY, Wang HY, Liu XP, Fan LY, Zhang L, Cao CX  Electrophoresis,2013, 34(9-10):1343-51.
286 The ammonia oxidizing and denitrifying prokaryotes associated with sponges from different sea areas  Han MQ, Li ZY, Zhang FL  Microb Ecol,2013, 66(2):427-36.
287 Phylogenetic diversity of Actinobacteria associated with soft coral Alcyonium gracllimum and stony coral Tubastraea coccinea in the east China sea  Yang S, Sun W, Tang C, Jin LL, Zhang FL, Li ZY  Microb Ecol,2013, 66(1):189-99.
288 Structural changes of gut microbiota in a rat non-alcoholic fatty liver disease model treated with a Chinese herbal formula  Yin XC, Peng JH, Zhao LP, Yu YP, Zhang X, Liu P, Feng Q, Hu YY, Pang XY  Syst Appl Microbiol,2013, 36(3):188-96.
289 In vivo investigation of the substrate recognition capability and activity affecting amino acid residues of glycosyltransferase FscMI in the biosynthesis of candicidin  Lei X, Kong LX, Zhang C, Liu Q, Yao F, Zhang WK, Deng ZX, You DL  Mol Biosyst,2013, 9(3):422-30.
290 Site selectivity for protein tyrosine nitration: insights from features of structure and topological network  Cheng SL, Lian BF, Liang J, Shi T, Xie L, Zhao YL  Mol Biosyst,2013, 9(11):2860-68.
291 Catalytic mechanism and origin of high activity of cellulase TmCel12A at high temperature: a quantum mechanical/molecular mechanical study  Lian P, Guo H-B, Smith JC, Wei D-Q, Guo H  Cellulose,2013, 1-13.
292 A stable and high-resolution isoelectric focusing capillary array device for micropreparative separation of proteins. Li S, Dong JY, Guo CG, Wu YX, Zhang W, Fan LY, Cao CX, Zhang WB. Talanta, 2013, 116:259-265
293 Impact of glutathione-HbA1c on HbA1c measurement in diabetes diagnosis via array isoelectric focusing, liquid chromatography, mass spectrometry and ELISA. Qi J, Shao CL, Li ZY, Gan LS, Fu XM, Bian WT, Zhao HY, Wang CY. Talanta, 2013,76(4):571-79.
294 Study on stability mechanism of immobilized pH gradient in isoelectric focusing via Svensson-Tiselius differential equation and moving reaction boundary  Guo C-G, Li S, Wang H-Y, Zhang D, Li G-Q, Zhang J, Fan L-Y, Cao C-X  Talanta,2013, 111:20-7.
295 Stump-like mathematical model and computer simulation on dynamic separation of capillary zone electrophoresis with different sample injections  Zhang J, Huang QF, Jin J, Chang J, Li S, Fan LY, Cao CX  Talanta,2013, 105:278-86.
296 Mathematical model and computer simulation on moving precipitate boundary electrophoresis for offline sample pre- concentration of heavy metal ion  Chang J, Zhang J, Wang HY, Fan LY, Fan YP, Li S, Cao CX  Talanta,2013, 103:314-21.
297 Car-Parrinello molecular dynamics/molecular mechanics (CPMD/MM) simulation study of coupling and uncoupling mechanisms of cytochrome P450cam  Lian P, Li J, Wang DQ, Wei DQ  J Phys Chem B,2013, 117(26):7849-56.
298 Conformational selection and induced fit in specific antibody and antigen recognition: SPE7 as a case study  Wang W, Ye W, Yu QF, Jiang C, Zhang J, Luo R, Chen HF  J Phys Chem B,2013, 117(17):4912-23.
299 Exogenous 1, 4‐butyrolactone stimulates A‐factor‐like cascade and validamycin biosynthesis in Streptomyces hygroscopicus 5008  Tan GY, Bai L, Zhong JJ  Biotechnol Bioeng,2013, 110(11):2984-93.
301 Induced effect of  Na plus on ganoderic acid biosynthesis in static liquid culture of Ganoderma lucidum via calcineurin signal transduction  Xu YN, Xia XX, Zhong JJ  Biotechnol Bioeng,2013, 110(7):1913-23.
302 Novel moving reaction boundary-induced stacking and separation of human hemoglobins in slab polyacrylamide gel electrophoresis  Tang YY, Wang HY, Chen L, Li S, Guo CG, Fan HZ, Cao CX, Fan LY  Anal Bioanal Chem,2013, 405(26):8587-95.
303 Role of filamentous phage SW1 in regulating the lateral flagella of Shewanella piezotolerans strain WP3 at low temperatures  Jian HH, Xiao X, Wang FP  Appl Environ Microbiol,2013, 79(22):7101-09.
304 Streptomyces lividans blasticidin S deaminase and its application in engineering a blasticidin S-producing strain for ease of genetic manipulation  Li L, Wu J, Deng ZX, Zabriskie TM, He XY  Appl Environ Microbiol,2013, 79(7):2349-57.
305 Transcriptome analysis of candidate genes and signaling pathways associated with light-induced brown film formation in Lentinula edodes  Tang LH, Jian HH, Song CY, Bao DP, Shang XD, Wu DQ, Tan Q, Zhang XH  Appl Microbiol Biotechnol,2013, 97(11):4977-89.
306 Structural comparison of the wild-type and drug-resistant mutants of the influenza A M2 proton channel by molecular dynamics simulations  Gu RX, Liu LA, Wang YH, Xu Q, Wei DQ  J Phys Chem B,2013, 117(20):6042-51.
307 Identification of Mur34 as the novel negative regulator responsible for the biosynthesis of muraymycin in Streptomyces sp NRRL30471  Xu DM, Liu G, Cheng L, Lu XH, Chen WQ, Deng ZX  PLoS One,2013, 8(10):e76068.
308 The regulatory role of ferric uptake regulator (Fur) during anaerobic respiration of Shewanella piezotolerans WP3  Yang XW, He Y, Xu J, Xiao X, Wang FP  PLoS One,2013, 8(10):e75588.
309 Discovery and characterization of BlsE, a radical S-adenosylL-methionine decarboxylase involved in the blasticidin S biosynthetic pathway  Feng J, Wu J, Dai N, Lin SJ, Xu HH, Deng ZX, He XY  PLoS One,2013, 8(7):e68545.
310 Characterization of two Streptomyces enzymes that convert ferulic acid to vanillin  Yang WW, Tang HZ, Ni J, Wu QL, Hua DL, Tao F, Xu P  PLoS One,2013, 8(6):e67339.
311 The different potential of sponge bacterial symbionts in N-2 release indicated by the phylogenetic diversity and abundance analyses of denitrification genes, nirK and nosZ  Zhang X, He LM, Zhang FL, Sun W, Li ZY  PLoS One,2013, 8(6):e65142.
312 Phylogenetically diverse ureC genes and their expression suggest the urea utilization by bacterial symbionts in marine sponge Xestospongia testudinaria  Su J, Jin LL, Jiang Q, Sun W, Zhang FL, Li ZY  PLoS One,2013, 8(5):e64848.
313 Global conformational selection and local induced fit for the recognition between intrinsic disordered p53 and CBP  Yu QF, Ye W, Wang W, Chen HF  PLoS One,2013, 8(3):e59627.
314 In vitro characterization of echinomycin biosynthesis: formation and hydroxylation of L-tryptophanyl-S-enzyme and oxidation of (2S,3S) beta- hydroxytryptophan  Zhang C, Kong LX, Liu Q, Lei X, Zhu T, Yin J, Lin BR, Deng ZX, You DL  PLoS One,2013, 8(2):e56772.
315 A trans-acting ketoreductase in biosynthesis of a symmetric polyketide dimer SIA7248  Zou Y, Yin HX, Kong DK, Deng ZX, Lin SJ  ChemBioChem,2013, 14(6):679-83.
316 Kink turn sRNA folding upon L7Ae binding using molecular dynamics simulations  Ye W, Yang JX, Yu QF, Wang W, Hancy J, Luo R, Chen HF  Phys Chem Chem Phys,2013, 15(42):18510-22.
317 Mathematical model and dynamic computer simulation on free flow zone electrophoresis  Zhang J, Yan J, Li S, Pang B, Guo CG, Cao CX, Jin XQ  Analyst,2013, 138(19):5734-44.
318 Theoretical and experimental studies on isotachophoresis in multi-moving chelation boundary system formed with metal ions and EDTA  Zhang W, Guo CG, Fan LY, Cao CX  Analyst,2013, 138(17):5039-51.
319 Determination of free acidic and alkaline residues of protein via moving reaction boundary titration in microdevice electrophoresis  Wang HY, Li S, Tang YY, Dong JY, Fan LY, Cao CX  Analyst,2013, 138(12):3544-51.
320 Model creation of moving redox reaction boundary in agarose gel electrophoresis by traditional potassium permanganate method  Xie HY, Liu Q, Li JH, Fan LY, Cao CX  Analyst,2013, 138(4):1137-40.
321 Identification of two novel anti-fibrotic benzopyran compounds produced by engineered strains derived from Streptomyces xiamenensis M1-94P that originated from deep-sea sediments  You Z-Y, Wang Y-H, Zhang Z-G, Xu M-J, Xie S-J, Han T-S, Feng L, Li X-G, Xu J  Marine drugs,2013, 11(10):4035-49.
322 Harnessing the potential of halogenated natural product biosynthesis by mangrove-derived actinomycetes  Li X-G, Tang X-M, Xiao J, Ma G-H, Xu L, Xie S-J, Xu M-J, Xiao X, Xu J  Marine drugs,2013, 11(10):3875-90.
323 Chlamydophila pneumoniae endonuclease IV prefers to remove mismatched 3 ' ribonucleotides: Implication in proofreading mismatched 3 '-terminal nucleotides in short-patch repair synthesis  Xie JJ, Liu XP, Han Z, Yuan H, Wang Y, Hou JL, Liu JH  DNA Repair,2013, 12(2):140-47.
324 Impact of resistance mutations on inhibitor binding to HIV-1 integrase  Chen Q, Buolamwini JK, Smith JC, Li A, Xu Q, Cheng X, Wei DQ  J Chem Inf Model,2013, 53(12):3297-307.
325 The rice bacterial pathogen Xanthomonas oryzae pv. oryzae produces 3-hydroxybenzoic acid and 4-hydroxybenzoic acid via XanB2 for use in xanthomonadin, ubiquinone, and exopolysaccharide biosynthesis  Zhou L, Huang TW, Wang JY, Sun S, Chen GY, Poplawsky A, He YW  Mol Plant-Microbe Interact,2013, 26(10):1239-48.
326 A rapid method for the detection of foodborne pathogens by extraction of a trace amount of DNA from raw milk based on amino-modified silica-coated magnetic nanoparticles and polymerase chain reaction  Bai YL, Song MH, Cui Y, Shi CL, Wang DP, Paoli GC, Shi XM  Anal Chim Acta,2013, 787:93-101.
327 A visual detection of protein content based on titration of moving reaction boundary electrophoresis  Wang HY, Guo CY, Guo CG, Fan LY, Zhang L, Cao CX  Anal Chim Acta,2013, 774:92-99.
328 Comparative genomic analysis of four representative plant growth-promoting rhizobacteria in Pseudomonas  Shen XM, Hu HB, Peng HS, Wang W, Zhang XH  BMC Genomics,2013, 14:271.
329 Production of acetol from glycerol using engineered Escherichia coli Zhu HL, Yi XY, Liu Y, Wood TK, Hu HB, Zhang XH Bioresour Technol,2013, 149:238-43.
330 Efficient ethanol production from corncob residues by repeated fermentation of an adapted yeast  Fan C, Qi K, Xia XX, Zhong JJ  Bioresour Technol,2013, 136:309-15.
331 Structural and computational studies of the maleate isomerase from Pseudomonas putida S16 reveal a breathing motion wrapping the substrate inside  Chen DD, Tang HZ, Lv Y, Zhang ZY, Shen KL, Lin K, Zhao YL, Wu G, Xu P  Mol Microbiol,2013, 87(6):1237-44.
332 The diffusible factor synthase XanB2 is a bifunctional chorismatase that links the shikimate pathway to ubiquinone and xanthomonadins biosynthetic pathways  Zhou L, Wang JY, Wang JH, Poplawsky A, Lin SJ, Zhu BS, Chang CQ, Zhou TL, Zhang LH, He YW  Mol Microbiol,2013, 87(1):80-93.
333 Phylogenetically diverse endozoic fungi in the South China Sea sponges and their potential in synthesizing bioactive natural products suggested by PKS gene and cytotoxic activity analysis  Yu ZS, Zhang BH, Sun W, Zhang FL, Li ZY  Fungal Divers,2013, 58(1):127-41.
334 Simple boric acid-based fluorescent focusing for sensing of glucose and glycoprotein via multipath moving supramolecular boundary electrophoresis chip  Dong JY, Li S, Wang HY, Meng QH, Fan LY, Xie HY, Cao CX, Zhang WB  Anal Chem,2013, 85(12):5884-91.
335 Tandem modifications of an epoxyquinone C7N pharmacophore  Bai LQ  Chem Biol,2013, 20(7):859-60.
336 Deciphering and engineering of the final step halogenase for improved chlortetracycline biosynthesis in industrial Streptomyces aureofaciens  Zhu T, Cheng XQ, Liu YT, Deng ZX, You DL  Metab Eng,2013, 19:69-78.
337 Metabolic and pathway engineering to influence native and altered erythromycin production through E. coli  Jiang M, Pfeifer BA  Metab Eng,2013, 19:42-49.
338 SecReT4: a web-based bacterial type IV secretion system resource  Bi DX, Liu LM, Tai C, Deng ZX, Rajakumar K, Ou HY  Nucleic Acids Res,2013, 41(D1):D660-D65.
339 RecJ-like protein from Pyrococcus furiosus has 3'-5' exonuclease activity on RNA: implications for proofreading of 3'-mismatched RNA primers in DNA replication  Yuan H, Liu XP, Han Z, Allers T, Hou JL, Liu JH  Nucleic Acids Res,2013, 41(11):5817-26.
340 Systematic unraveling of the unsolved pathway of nicotine degradation in Pseudomonas. Tang HZ., Wang LJ., Wang WW., Yu H., Zhang KZ., Yao YX., and Xu P.* PloS Genet,2013. 9(10):e1003923.
341 An opportunistic pathogen isolated from the gut of an obese human causes obesity in germfree mice  Fei N, Zhao LP  Isme J,2013, 7(4):880-84.
342 Structural and energetic analysis of drug inhibition of the influenza A M2 proton channel  Gu RX, Liu LA, Wei DQ  Trends Pharmacol Sci,2013, 34(10):571-80.
343 Structural insight into the mutual recognition and regulation between suppressor of fused and Gli/Ci  Zhang Y, Fu L, Qi XL, Zhang ZY, Xia YX, Jia JH, Jiang J, Zhao Y, Wu G  Nat Commun,2013, 4:2608.
344 Structural modulation of gut microbiota in life-long calorie-restricted mice  Zhang CH, Li SF, Yang L, Huang P, Li WJ, Wang SY, Zhao GP, Zhang MH, Pang XY, Yan Z, Liu Y, Zhao LP  Nat Commun,2013, 4:2163.
345 Characterization of streptonigrin biosynthesis reveals a cryptic carboxyl methylation and an unusual oxidative cleavage of a N-C bond  Xu F, Kong DK, He XY, Zhang Z, Han M, Xie XQ, Wang P, Cheng HR, Tao MF, Zhang LP, Deng ZX, Lin SJ  J Am Chem Soc,2013, 135(5):1739-48.
346 Stereospecific biosynthesis of β-methyl tryptophan from L-tryptophan features a stereochemical switch. Zou y, Fang Q, Yin H, Liang Z, Kong D, Bai L, Deng Z, Lin S Angew Chem Int Ed,2013, 52:12951-955.
347 The gut microbiota and obesity: from correlation to causality  Zhao LP  Nat Rev Microbiol,2013, 11(9):639-47.
348 A hadoop-based method to predict potential effective drug combination  Sun YF, Xiong Y, Xu Q,  Wei DQ Biomed Res Int, 2014:196858
349 How reliable are molecular dynamics simulations of membrane active antimicrobial peptides?  Wang YK, Zhao TZ, Wei DQ, Strandberg E, Ulrich AS, Ulmschneider JP Biochim Biophys Acta-Biomembr, 2014, 9:2280-2288
350 Catalytic mechanism and origin of high activity of cellulase TmCel12A at high temperature: A quantum mechanical/molecular mechanical study  Lian P, Guo HB, Smith JC, Wei DQ, Guo H Cellulose, 2014, 21(2):937-949
351 Predicting protein-ligand interactions based on chemical preference features with its application to new D-amino acid oxidase inhibitor discovery  Zhao MZ, Chang HT, Zhou Q, Zeng T, Shih CS, Liu ZP, Chen LN, Wei DQ Curr Pharm Design, 2014, 20(32):5202-5211
352 Identification and characterization of the biosynthetic gene cluster of polyoxypeptin A, a potent apoptosis inducer  Du YH, Wang YM, Huang TT, Tao MF, Deng ZX, Lin SJ BMC Microbiol, 2014, 14:30
353 Seasonal dynamics and diversity of bacteria in retail oyster tissues Wang DP, Zhang Q, Cui Y, ShiXM Int J Food Microbiol, 2014, 173:14-20
354 Comparisons of the fungal and protistan communities among different marine sponge holobionts by pyrosequencing He LM, Liu F, Karuppiah V, Ren Y, Li ZY Microb Ecol, 2014, 67(4):951-961
355 Pyrosequencing reveals diverse microbial community associated with the Zoanthid Palythoa australiae from the South China sea Sun W, Zhang FL, He LM, Li ZY Microb Ecol, 2014, 67(4):942-950
356 A gut microbiota-targeted dietary intervention for amelioration of chronic inflammation underlying metabolic syndrome  Xiao SM, Fei N, Pang XY, Shen J, Wang LH, Zhang BR, Zhang MH, Zhang XJ, …Feng J, Yan FY, Zhao NS, Liu JQ, Long WM, Zhao LP FEMS Microbiol Ecol, 2014, 87(2):357-367
357 Gut microbiota-based translational biomarkers to prevent metabolic syndrome via nutritional modulation  Xiao SM, Zhao LP FEMS Microbiol Ecol, 2014, 87(2):303-314
358 Operon for biosynthesis of lipstatin, the beta-lactone inhibitor of human Bai TL, Zhang DZ,  Lin SJ, Long QS,   Wang YM, Ou HY,  Kang QJ, Deng ZX,  Wen L, Tao MF Appl Environ Microbiol, 2014, 80(24):7473-7483
359 Efficient simultaneous saccharification and fermentation of inulin to 2,3-butanediol by thermophilic Bacillus licheniformis ATCC 14580  Li LX, Chen C, Li K, Wang Y, Gao C, Ma CQ, Xu P Appl Environ Microbiol, 2014, 80(20):6458-6464
360 Biosynthesis of the beta-methylarginine residue of peptidyl nucleoside arginomycin in Streptomyces arginensis NRRL 15941  Feng J, Wu J, Gao J, Xia ZG, Deng ZX, He XY Appl Environ Microbiol, 2014, 80(16):5021-5027
361 HrcT is a key component of the type III secretion system in Xanthomonas spp and also regulates the expression of the key hrp transcriptional activator Hrpx Liu ZY, Zou LF, Xue B, Cai LL, Ma WX, Xiong L, Ji ZY, Chen GY Appl Environ Microbiol, 2014, 80(13):3908-3919
362 Development of a sigde-based real-time reverse-transcriptase PCR for the detection of viable Salmonella enterica Zhou M, Yang JL, Zhou XJ, Liu B, Liu DX, Yuan CG, He YP, Pan LW, Shi XM Foodborne Pathog Dis, 2014, 11(7):537-544
363 Impact of sod on the expression of stress-related genes in Listeria monocytogenes 4b G with/without paraquat treatment Suo YJ, Liu YH, Zhou XJ, Huang YY, Shi CL, Matthews K, Shi XM J Food Sci, 2014, 79(9):M1745-M1749
364 Phenotypic and genotypic antimicrobial resistance traits of foodborne Staphylococcus aureus isolates from Shanghai Xu J, Shi CL, Song MH, Xu XB, Yang PY, Paoli G, Shi XM J Food Sci, 2014, 79(4):M635-M642
365 A fullerene colloidal suspension stimulates the growth and denitrification ability of wastewater treatment sludge-derived bacteria  Huang F, Ge L, Zhang B, Wang Y, Tian H, Zhao LP, He YL, Zhang XJ Chemosphere, 2014, 108411-417
366 Transferring of red monascus pigments from nonionic surfactant to hydrophobic ionic liquid by novel microemulsion extraction Shen LJ, Zhang XH, Liu MZ, Wang ZL Separation and purification technology, 2014, 138:34-40
367 Specific recognition mechanism between RNA and KH3 domain of nova-2 protein Yu QF, Ye W, Jiang C, Luo R, Chen HF J Phys Chem B, 2014, 118(43):12426–12434
368 Transmembrane permeation mechanism of charged methyl guanidine Wang YK, Hu D, Wei DQ J Chem Theory Comput, 2014, 10(4):1717-1726
369 Advance in the research on quinomycins biosynthesis  Zhang C, Kong LX, Lei X, Deng ZX, You DL Chinese J Org Chem, 2014, 34(6):1240-1252
370 Theoretical studies on the mechanism, enantioselectivity, and axial ligand effect of a ru(salen)-catalyzed asymmetric cyclopropanation reaction Shi T, Luo Y, Wang XL, Lu SY, Zhao YL, Zhang J Organometallics, 2014, 33(14):3673-3682
371 Theoretical studies of the binding-affinity and reactivity between laccase and phenolic substrates Qi YB, Zhu JR, Sun YJ, Du Y, Chu JJ, Shi T, Zhao YL, Wang XL Chem J Chin Univ-Chin, 2014, 35(4):776-783
372 Influence of counteranions on catalytic ability of immobilized laccase in cu-alginate matrices: Inhibition of chloride and activation of acetate  Pan T, Sun YJ, Wang XL, Shi T, Zhao YL Chinese Chem Lett, 2014, 25(7):983-988
373 A new glutarimide derivative from marine sponge-derived Streptomyces anulatus S71 Sun DD, Sun W, Yu YX, Li ZY, Deng ZX, Lin SJ Nat Prod Res, 2014, 28(19):1602-1606
374 Novel pyrrolobenzoxaboroles: Design, synthesis, and biological evaluation against Trypanosome brucei Wu PH, Zhang J, Meng QQ, Nare B, Jacobs RT, Zhou HC Eur J Med Chem, 2014, 81:59-75
375 Moving interaction boundary electrophoresis and its selective focusing of target guest molecule norfloxacin in urine by a cyclodextrin host  Fan LY, Luo XJ, Li S, Zhang W, Cao CX Anal Methods, 2014, 6(12):4360-4365
376 Crystal structure of dszc from Rhodococcus sp XP at 179 angstrom Liu SH, Zhang CG, Su TT, Wei TD, Zhu DY, Wang K, Huang Y, Dong YH, Yin K, Xu SJ, Xu P, Gu LC Proteins, 2014, 82(9):1708-1720
377 X-ray structure of a Hg2+ complex of mercuric reductase (Mera):And QM/MM study of Hg2+ transfer between the C-terminal and buried catalytic site cysteine pairs  Lian H, Guo HB,   Riccardi D,   Dong AP, Jerry M Parks,  Xu Q, Emil F Pai,Susan M Miller,Wei DQ, Jeremy C Smith, Guo H Biochemistry, 2014,25;53(46):7211-7222
378 Purification, crystallization and preliminary X-ray analysis of the inverse F-BAR domain of the human srGAP2 protein  Wang HP, Zhang Y, Zhang ZY, Jin WL, Wu G Acta Crystallogr F-Struct Biol Cryst Commun, 2014, 70123-126
379 Purification and characterization of a thermostable aliphatic amidase from the hyperthermophilic archaeon Pyrococcus yayanosii CH1  Fu L, Li XG, Xiao X, Xu J Extremophiles, 2014, 18(2):429-440
380 Analysis of Streptomyces coelicolor membrane proteome using two-dimensional native/native and native/sodium dodecyl sulfate gel electrophoresis Li F, Liang J, Wang W, Zhou X, Deng Z, Wang Z Anal Biochem, 2014, 465C:148-155
381 New force field on modeling intrinsically disordered proteins  Wang W, Ye W, Jiang C, Luo R, Chen HF Chem Biol Drug Des, 2014, 84(3):253-269
382 A recombinant adenovirus expressing CFP10, ESAT6, Ag85A and Ag85B of Mycobacterium tuberculosis elicits strong antigen-specific immune responses in mice Li W, Deng GC, Li M, Zeng J, Zhao LP, Liu XM, Wang YJ Mol Immunol, 2014, 62(1):86-95
383 Features of S-nitrosylation based on statistical analysis and molecular dynamics simulation: Cysteine acidity, surrounding basicity, steric hindrance and local flexibility Cheng SL, Sh iT, Wang XL, Liang J, Wu HY, Xie L, Li YX, Zhao YL Mol Biosyst, 2014, 10(10):2597-2606
384 AvrXa7-Xa7 mediated defense in rice can be suppressed by transcriptional activator-like effectors TAL6 and TAL11a from Xanthomonas oryzae pv. oryzicola Ji ZY, Xiong L, Zou LF, Li YR, Ma WX, Liu L, Zakria M, Ji GH, Chen GY Mol Plant-Microbe Interact, 2014, 27(9):983-995
385 Enhanced enzyme kinetic stability by increasing rigidity within the active site Xie Y, An J, Yang GY, Wu G, Zhang Y, Cui L, Feng Y J Biol Chem, 2014, 289(11):7994-8006
386 Glycerol dehydrogenase plays a dual role in glycerol metabolism and 2,3-butanediol formation in Klebsiell pneumoniae Wang Y, Tao F, Xu P J Biol Chem, 2014, 289(9):6080-6090
387 Stratified community responses to methane and sulfate supplies in mud volcano deposits: Insights from an in vitro experiment Zhang Y, Maignien L, Stadnitskaia A, Boeckx P, Xiao X, Boon N PLoS One, 2014, 9(11):e113004
388 Mutation of a Salmonella serogroup-C1-specific gene abrogates O7-antigen biosynthesis and triggers nacl-dependent motility deficiency  Zhou XJ, Liu B, Shi CL, Shi XM PLoS One, 2014, 9(9):e106708
389 Characterization of the medium- and long-chain n-alkanes degrading Pseudomonas aeruginosa strain SJTD-1 and its alkane hydroxylase genes  Liu H, Xu J, Liang RB, Liu JH PLoS One, 2014, 9(8):e105506
390 Betaine and beet molasses enhance L-lactic acid production by Bacillus coagulans Xu K, Xu P PLoS One, 2014, 9(6):e100731
391 Characterization of the xiamenmycin biosynthesis gene cluster in Streptomyces xiamenensis 318  Yang Y, Fu L, Zhang JL, Hu LH, Xu , Xu J PLoS One, 2014, 9(6):e99537
392 Significance of agitation-induced shear stress on mycelium morphology and lavendamycin production by engineered Streptomyces flocculus Xia X, Lin SJ, Xia XX, Cong FS, Zhong JJ Appl Microbiol Biotechnol, 2014, 98(10):4399-4407
392 Reaction kinetics for the biocatalytic conversion of phenazine-1-carboxylic acid to 2-hydroxyphenazine Chen MM, Cao HX, Peng HS, Hu HB, Wang W, Zhang XH PLoS One, 2014, 9(6):e98537
393 Genetically engineered Pichia pastoris yeast for conversion of glucose to xylitol by a single-fermentation process  Cheng HR, Lv JY, Wang HW, Wang B, Li ZL, Deng ZX Appl Microbiol Biotechnol, 2014, 98(8):3539-3552
393 An improved single cell ultrahigh throughput screening method based on in vitro compartmentalization Ma FQ, Xie Y, Huang C, Feng Y, Yang GY PLoS One, 2014, 9(2):e89785
394 New in situ capture quantitative (real-time) reverse transcription-PCR method as an alternative approach for determining inactivation of tulane virus  Wang DP, Xu SX, Yang D, Young GM, Tian P Appl Microbiol Biotechnol, 2014, 80(7):2120-2124
394 Physiological and biochemical characterization of a novel nicotine-degrading bacterium Pseudomonas geniculata N1  Liu YH, Wang LJ, Huang KM, Wang WW, Nie XL, Jiang Y, Li PP, Liu SS, Xu P, Tang HZ PLoS One, 2014, 9(1):e84399
395 Induction of ganoderic acid biosynthesis by Mn2+ in static liquid cultivation of Ganoderma lucidum Xu YN, Xia XX, Zhong JJ Biotechnol Bioeng, 2014, 111(11):2358-2365
395 Characterization of an algicidal bacterium Brevundimonas J4 and chemical defense of Synechococcus sp. BN60 against bacterium J4 Lin SQ, Pan JL, Li ZH, Liu XL, Tan J,Yang H Harmful Algae, 2014, 371-7
396 Biodiesel quality and biochemical changes of microalgae Chlorella pyrenoidosa and Scenedesmus obliquus in response to nitrate levels  Wu HQ, Miao XL Bioresour Technol, 2014, 170421-427
396 A new strategy for highly efficient single-drop microextraction with a liquid-gas compound pendant drop  Xie HY, Yan J, Jahan S, Zhong R, Fan LY, Xiao H, Jin XQ, Cao CX Analyst, 2014, 139(10):2545-2550
397 Efficient production of 2,3-butanediol from corn stover hydrolysate by using a thermophilic Bacillus licheniformis strain  Li LX, Li K, Wang K, Chen C, Gao C, Ma CQ, Xu P Bioresour Technol, 2014, 170256-261
397 Retardation signal for fluorescent determination of total protein content via rapid and sensitive chip moving reaction boundary electrophoretic titration Wang HY, Shi YT, Yan J, Dong JY, Li S, Xiao H, Xie HY, Fan LY, Cao CX Anal Chem, 2014, 86(6):2888-2894
398 Efficient calcium lactate production by fermentation coupled with crystallization-based in situ product removal  Xu K, Xu P Bioresour Technol, 2014, 16333-39
398 Enhanced production of validamycin A in Streptomyces hygroscopicus 5008 by engineering validamycin biosynthetic gene cluster  Zhou TC, Kim BG, Zhong JJ Appl Microbiol Biotechnol, 2014, 98(18):7911-7922
399 Efficient production of L-lactic acid using co-feeding strategy based on cane molasses/glucose carbon sources  Xu K, Xu P Bioresour Technol, 2014, 15323-29
399 Marine actinobacteria associated with marine organisms and their potentials in producing pharmaceutical natural products  Valliappan K, Sun W, Li ZY Appl Microbiol Biotechnol, 2014, 98(17):7365-7377
400 Pathological phenotypes and in vivo DNA cleavage by unrestrained activity of a phosphorothioate- based restriction system in Salmonella Cao B, Cheng QX, Gu C, Yao F, DeMott MS, Zheng XQ, Deng ZX, Dedon PC, You DL Mol Microbiol, 2014, 93(4):776-785
400 A freshwater bacterial strain, Shewanella sp. lzh-2, isolated from lake taihu and its two algicidal active substances, hexahydropyrrolo 1,2-a pyrazine-1,4-dione and 2, 3-indolinedione  Li ZH, Lin SQ, Liu XL, Tan J, Pan JL, Yang H Appl Microbiol Biotechnol, 2014, 98(10):4737-4748
401 An unusual repressor controls the expression of a crucial nicotine-degrading gene cluster in Pseudomonas putida S16 Wang LJ, Tang HZ, Yu H, Yao YX, Xu P Mol Microbiol, 2014, 91(6):1252-1269
402 Structural insights into the specific recognition of N-heterocycle biodenitrogenation-derived substrates by microbial amide hydrolases Wu G, Chen DD, Tang HZ, Ren YL, Chen QH, Lv Y, Zhang ZY, Zhao YL, Yao YX, Xu P Mol Microbiol, 2014, 91(5):1009-1021
403 Hydrophobic drug-triggered self-assembly of nanoparticles from silk-elastin-like protein polymers for drug delivery  Xia XX, Wang M, Lin YA, Xu QB, Kaplan DL Biomacromolecules, 2014, 15(3):908-914
404 Genomic analysis of thermophilic Bacillus coagulans strains: Efficient producers for platform bio-chemicals  Su F, Xu P Sci Rep, 2014, 29(4):3926
405 Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Lamellomorpha sp indicated by metagenomics Li ZY, Wang YZ, He LM, Zheng HJ Sci Rep, 2014, 27(4):3895
406 Green strategy from waste to value-added-chemical production: Efficient biosynthesis of 6-hydroxy-3-succinoyl-pyridine by an engineered biocatalyst  Yu H, Tang HZ, Xu P Sci Rep, 2014, 23(4):5397
407 Biomineralization mediated by anaerobic methane-consuming cell consortia  Chen Y, Li YL, Zhou GT, Li H, Lin YT, Xiao X, Wang FP Sci Rep, 2014, 16(4):5696
408 Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways Wang FP, Zhang Y, Chen Y, He Y, Qi J, Hinrichs KU, Zhang XX, Xiao X, Boon N Isme J, 2014, 8(5):1069-1078
409 Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses Meng J, Xu J, Qin D, He Y, Xiao X, Wang FP Isme J, 2014, 8(3):650-659
410 Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry Zhao G, Wu G, Zhang Y, Liu G, Han TS, Deng ZX, He XY Nucleic Acids Res, 2014, 42(12):8115-8124
411 Microbial lactate utilization: Enzymes, pathogenesis, and regulation Jiang TY, Gao C, Ma CQ, Xu P Trends Microbiol, 2014, 22(10):589-599
412 Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences Cao B, Chen C, DeMottMS, Cheng QX, Clark TA, Xiong XL, Zheng XQ, Zhou XF, Deng ZX, … You DL, Wang LR,Chen S, Dedon PC Nat Commun, 2014, 5:3591
413 Crystallization and preliminary X-ray analysis of the type IV restriction endonuclease ScoMcrA from Streptomyces coelicolor, which cleaves both Dcm-methylated DNA and phosphorothioated DNA Liu G, Zhang Z, Zhao G, Deng Z, Wu G, He X Acta Crystallogr F,2015, 71(Pt 1):57-60.
414 Molecular dynamics simulation studies of the wild type and E92Q/N155H mutant of Elvitegravir-resistance HIV-1 integrase Chen Q, Cheng X, Wei D, Xu Q Interdiscip Sci,2015, 7(1):36-42.
415 Improved feature-based prediction of SNPs in human cytochrome P450 enzymes Li L, Xiong Y, Zhang ZY, Guo Q, Xu Q, Liow HH, Zhang YH, Wei DQ Interdiscip Sci,2015, 7(1):65-77.
416 Detection of erm(X)- mediated antibiotic resistance in Bifidobacterium longum subsp. longum. Luo C, Hang X, Liu X, Zhang M, Yang X, Yang H. Ann Microbiol,2015, 65:1985–1991
417 Isolation and structural identification of two bioactive phenazines from Luo Q, Hu HB, Peng HS, Zhang XH, Wang W Chinese J Chem Eng,2015, 699–703
418 An efficient genetic knockout system based on linear DNA fragment homologous recombination for halophilic archaea Wang XL, Jiang C, Liu JH, Liu XP Yi chuan,2015, 37(4):388-95.
419 Overexpression of afsR and optimization of metal chloride to improve lomofungin production in Streptomyces lomondensis S015 Wang W, Wang H, Hu H, Peng H, Zhang X J Microbiol Biotechn,2015, 25(5):672-80.
420 Phylogenetic diversity of sulphate-reducing Desulfovibrio associated with three South China Sea sponges Zhang D, Sun W, Feng G, Zhang F, Anbuchezhian R, Li Z, Jiang Q Lett Appl Microbiol,2015, 60(5):504-12.
421 Two nucleoside receptors from Streptomyces coelicolor: expression of the genes and characterization of the recombinant proteins Li F, Liang J, Wang W, Zhou X, Deng Z, Wang Z Protein Expres Purif,2015, 109:40-6.
422 A new alkaline lipase obtained from the metagenome of marine sponge Ircinia sp Su J, Zhang F, Sun W, Karuppiah V, Zhang G, Li Z, Jiang Q World J Microb Biot,2015, 31(7):1093-102.
423 Recent progress on structural bioinformatics research of cytochrome P450 and its impact on drug discovery Zhang T, Wei D Adv Exp Med Biol,2015, 827:327-39.
424 Introduction to structural bioinformatics Xu Q, Dai H, Zhao T, Wei D Adv Exp Med Biol,2015, 827:1-7.
425 Human cytochrome P450 and personalized medicine Chen Q, Wei D Adv Exp Med Biol,2015, 827:341-51.
426 Exploring the ligand-protein networks in traditional chinese medicine: current databases, methods and applications Zhao M, Wei D Adv Exp Med Biol,2015, 827:227-57.
427 Drug inhibition and proton conduction mechanisms of the influenza a M2 proton channel Gu R, Liu LA, Wei D Adv Exp Med Biol,2015, 827:205-26.
428 Bioinformatics tools for discovery and functional analysis of single nucleotide polymorphisms Li L, Wei D Adv Exp Med Biol,2015, 827:287-310.
429 Binding induced intrinsically disordered protein folding with molecular dynamics simulation Chen H Adv Exp Med Biol,2015, 827:111-21.
430 Applications of rare event dynamics on the free energy calculations for membrane protein systems Wang Y, Gu R, Fan H, Ulmschneider J, Wei D Adv Exp Med Biol,2015, 827:71-82.
431 An application of QM/MM simulation: the second protonation of cytochrome P450 Lian P, Wei D Adv Exp Med Biol,2015, 827:311-24.
432 The alpha7 nAChR selective agonists as drug candidates for Alzheimer's disease Fan H, Gu R, Wei D Adv Exp Med Biol,2015, 827:353-65.
433 Erratum to: 'Antitumor and antimetastatic activities of chloroform extract of medicinal mushroom Cordyceps taii in mouse models' Liu RM, Zhang XJ, Liang GY, Yang YF, Zhong JJ, Xiao JH Bmc Complem Altern M,2015, 15:284.
434 Antitumor and antimetastatic activities of chloroform extract of medicinal mushroom Cordyceps taii in mouse models Liu RM, Zhang XJ, Liang GY, Yang YF, Zhong JJ, Xiao JH Bmc Complem Altern M,2015, 15:216.
435 (+)Terrein inhibits human hepatoma Bel7402 proliferation through cell cycle arrest Zhang F, Mijiti M, Ding W, Song J, Yin Y, Sun W, Li Z Oncol Rep,2015, 33(3):1191-200.
436 Characterization of a novel thermostable patatin-like protein from a Guaymas basin metagenomic library Fu L, He Y, Xu F, Ma Q, Wang F, Xu J Extremophiles,2015, 19(4):829-40.
437 Differences in acid tolerance between Bifidobacterium breve BB8 and its acid-resistant derivative B. breve BB8dpH, revealed by RNA-sequencing and physiological analysis Yang X, Hang X, Tan J, Yang H Anaerobe,2015, 33:76-84.
438 Selectivity mechanism of ATP-competitive Inhibitors for PKB and PKA Wu K, Pang J, Song D, Zhu Y, Wu C, Shao T, Chen H Chem Biol Drug Des,2015, 86(1):9-18.
439 Kangiella profundi sp. nov., isolated from deep-sea sediment Xu FD, Li XG, Xiao X, Xu J Int J Syst Evol Microbiol. 2015, 65(7):2315-9.
440 Design of hyperthermophilic lipase chimeras by key motif-directed recombination Zhou X, Gao L, Yang G, Liu D, Bai A, Li B, Deng Z, Feng Y Chembiochem.2015, 16(3):455-62.
441 Preparation and characterization of yellow Monascus pigments Zhong SJ, Zhang XH, Wang ZL. Sep Purif Technol,2015, 150:139-144
442 Revealing the binding mode between respiratory syncytial virus fusion protein and benzimidazole-based inhibitors Ji D, Ye W, Chen H Mol Biosyst,2015, 11(7):1857-66.
443 Mixed wastewater coupled with CO2 for microalgae culturing and nutrient removal Yao L, Shi J, Miao X PloS One,2015, 10(9):e0139117.
444 Identification of the lomofungin biosynthesis gene cluster and associated flavin-dependent monooxygenase gene in Streptomyces lomondensis S015 Zhang C, Sheng C, Wang W, Hu H, Peng H, Zhang X PloS One,2015, 10(8):e0136228.
445 Elucidation of enzymatic mechanism of phenazine biosynthetic protein PhzF using QM/MM and MD simulations Liu F, Zhao YL, Wang X, Hu H, Peng H, Wang W, Wang JF, Zhang X PloS One,2015, 10(9):e0139081.
446 Active site loop conformation regulates promiscuous activity in a lactonase from Geobacillus kaustophilus HTA426 Zhang Y, An J, Yang GY, Bai A, Zheng B, Lou Z, Wu G, Ye W, Chen HF, Feng Y, Manco G PloS One,2015, 10(2):e0115130.
447 Theoretical study on the relationship between Rp-phosphorothioation and base-step in S-DNA: based on energetic and structural analysis Chen L, Wang XL, Shi T, Wu T, Deng Z, Zhao YL J Phys Chem B,2015, 119(2):474-81.
448 Recognition mechanism between Lac repressor and DNA with correlation network analysis Xu L, Ye W, Jiang C, Yang J, Zhang J, Feng Y, Luo R, Chen HF J Phys Chem B,2015,119(7):2844-56.
449 Destabilization of alzheimer's abeta42 protofibrils with a novel drug candidate wgx-50 by molecular dynamics Simulations Fan HM, Gu RX, Wang YJ, Pi YL, Zhang YH, Xu Q, Wei DQ J Phys Chem B,2015, 119(34):11196-202.
450 Relationship between acid tolerance and cell membrane in Bifidobacterium, revealed by comparative analysis of acid-resistant derivatives and their parental strains grown in medium with and without Tween 80 Yang X, Hang X, Zhang M, Liu X, Yang H Appl Microbiol Biot,2015, 99(12):5227-36.
451 Positive and negative regulation of GlnR in validamycin A biosynthesis by binding to different loci in promoter region Qu S, Kang Q, Wu H, Wang L, Bai L Appl Microbiol Biot,2015, 99(11):4771-83.
452 Metabolic engineering of Escherichia coli to enhance acetol production from glycerol Yao R, Liu Q, Hu H, Wood TK, Zhang X Appl Microbiol Biot,2015, 99(19):7945-52.
453 Functional gene-based discovery of phenazines from the actinobacteria associated with marine sponges in the South China Sea Karuppiah V, Li Y, Sun W, Feng G, Li Z Appl Microbiol Biot,2015, 99(14):5939-50.
454 Engineered biosynthesis of pimaricin derivatives with improved antifungal activity and reduced cytotoxicity Qi Z, Kang Q, Jiang C, Han M, Bai L Appl Microbiol Biot,2015, 99(16):6745-52.
455 Crude oil degradation by bacterial consortia under four different redox and temperature conditions Xiong S, Li X, Chen J, Zhao L, Zhang H, Zhang X Appl Microbiol Biot,2015, 99(3):1451-61.
456 Comprehensive characterization of sphingolipid ceramide N-deacylase for the synthesis and fatty acid remodeling of glycosphingolipids Han YB, Wu L, Rich JR, Huang FT, Withers SG, Feng Y, Yang GY Appl Microbiol Biot,2015, 99(16):6715-26.
457 Algicidal activity of Bacillus sp. Lzh-5 and its algicidal compounds against Microcystis aeruginosa Li Z, Geng M, Yang H Appl Microbiol Biot,2015, 99(2):981-90.
458 Accumulation of yellow Monascus pigments by extractive fermentation in nonionic surfactant micelle aqueous solution Xiong X, Zhang X, Wu Z, Wang Z Appl Microbiol Biot,2015, 99(3):1173-80.
459 A tunable isoelectric focusing via moving reaction boundary for two-dimensional gel electrophoresis and proteomics Guo CG, Shang Z, Yan J, Li S, Li GQ, Liu RZ, Qing Y, Fan LY, Xiao H, Cao CX Talanta,2015, 137:197-203.
460 Quantitative proteomic analysis of microdissected oral epithelium for cancer biomarker discovery Xiao H, Langerman A, Zhang Y, Khalid O, Hu S, Cao CX, Lingen MW, Wong DT Oral Oncol,2015, 51(11):1011-9.
461 pSW2, a novel low-temperature-inducible gene expression vector based on a filamentous phage of the deep-sea bacterium Shewanella piezotolerans WP3 Yang XW, Jian HH, Wang FP Appl Environ Microb,2015, 81(16):5519-26.
462 Molybdenum-containing nicotine hydroxylase genes in a nicotine degradation pathway that is a variant of the pyridine and pyrrolidine pathways Yu H, Tang H, Li Y, Xu P Appl Environ Microb,2015, 81(24):8330-8.
463 molecular mechanism of nicotine degradation by a newly isolated strain, Ochrobactrum sp. strain SJY1 Yu H, Tang H, Zhu X, Li Y, Xu P Appl Environ Microb,2015, 81(1):272-81.
464 Identification of a specific maleate hydratase in the direct hydrolysis route of the gentisate pathway Liu K, Xu Y, Zhou NY Appl Environ Microb,2015, 81(17):5753-60.
465 The host genotype and environment affect strain types of Bifidobacterium longum subsp. longum Inhabiting the Intestinal tracts of twins Zhang M, Hang X, Tan J, Yang H Appl Environ Microb,2015, 81(14):4774-81.
466 Test and evaluation of ff99IDPs force field for intrinsically disordered proteins Ye W, Ji D, Wang W, Luo R, Chen HF J Chem Inf Model,2015, 55(5):1021-9.
467 Metagenome and metatranscriptome revealed a highly active and intensive Sulfur cycle in an oil-Immersed hydrothermal chimney in Guaymas Basin He Y, Feng XY, Fang J, Zhang Y, Xiao X Front Microbiol,2015, 6:1236.
468 The regulatory function of LexA is temperature-dependent in the deep-sea bacterium Shewanella piezotolerans WP3 Jian H, Xiong L, He Y, Xiao X Front Microbiol,2015, 6:627.
469 Recombinant expression library of Pyrococcus furiosus constructed by high-throughput cloning: a useful tool for functional and structural genomics Yuan H, Peng L, Han Z, Xie JJ, Liu XP Front Microbiol,2015, 6:943.
470 Interactions of Dnd proteins involved in bacterial DNA phosphorothioate modification Xiong W, Zhao G, Yu H, He X Front Microbiol,2015, 6:1139.
471 Bacteria in the injection water differently impacts the bacterial communities of production wells in high-temperature petroleum reservoirs Ren H, Xiong S, Gao G, Song Y, Cao G, Zhao L, Zhang X Front Microbiol,2015, 6:505.
472 Actinomycetes from the South China Sea sponges: isolation, diversity, and potential for aromatic polyketides discovery Sun W, Zhang F, He L, Karthik L, Li Z Front Microbiol,2015, 6:1048.
473 The drinking water treatment process as a potential source of affecting the bacterial antibiotic resistance Bai XH, Ma XL, Xu FM, Li J, Zhang H, Xiao X Sci Total Environ,2015, 533:24-31.
474 A highly efficient three-phase single drop microextraction technique for sample preconcentration Jahan S, Xie H, Zhong R, Yan J, Xiao H, Fan L, Cao C Analyst,2015, 140(9):3193-200.
475 Target protein separation and preparation by free-flow electrophoresis coupled with charge-to-mass ratio analysis Shen QY, Guo CG, Yan J, Zhang Q, Xie HY, Jahan S, Fan LY, Xiao H, Cao CX J Chromatogr A,2015, 1397:73-80.
476 Reciprocating free-flow isoelectric focusing device for preparative separation of proteins Kong FZ, Yang Y, Wang Y, Li GQ, Li S, Xiao H, Fan LY, Liu SR, Cao CX J Chromatogr A,2015 27, 1422:318-24.
477 Regulation of DNA phosphorothioate modifications by the transcriptional regulator DptB in Salmonella Cheng Q, Cao B, Yao F, Li J, Deng Z, You D Mol Microbiol,2015, 97(6):1186-94.
478 A facile method for controlling the reaction equilibrium of sphingolipid ceramide N-deacylase for lyso-glycosphingolipid production Huang FT, Han YB, Feng Y, Yang GY J Lipid Res,2015, 56(9):1836-42.
479 Multicomponent kinetic analysis and theoretical studies on the phenolic intermediates in the oxidation of eugenol and isoeugenol catalyzed by laccase Qi YB, Wang XL, Shi T, Liu S, Xu ZH, Li X, Shi X, Xu P, Zhao YL Phys Chem Chem Phys, 2015, 17(44):29597-607.
480 Crystal structure of PnpCD, a two-subunit Hydroquinone 1,2-Dioxygenase, reveals a novel structural class of Fe2+-dependent dioxygenases Liu S, Su T, Zhang C, Zhang WM, Zhu D, Su J, Wei T, Wang K, Huang Y, Guo L, Xu S, Zhou NY, Gu L J Biol Chem,2015, 290(40):24547-60.
481 Mapping the resistance-associated mobilome of a carbapenem-resistant Klebsiella pneumoniae strain reveals insights into factors shaping these regions and facilitates generation of a 'resistance-disarmed' model organism Bi D, Jiang X, Sheng ZK, Ngmenterebo D, Tai C, Wang M, Deng Z, Rajakumar K, Ou HY J Antimicrob Chemother,2015, 70(10):2770-4.
482 Sparsomycin biosynthesis highlights unusual module architecture and processing mechanism in non-ribosomal peptide synthetase Rui Z, Huang W, Xu F, Han M, Liu X, Lin S, Zhang W ACS Chem Biol, 2015, 10(8):1765-9.
483 Real-time ArcGIS and heterotrophic plate count based chloramine disinfectant control in water distribution system Bai X, Zhi X, Zhu H, Meng M, Zhang M Water Res, 2015, 68:812-20.
484 A functional 4-hydroxybenzoate degradation pathway in the phytopathogen Xanthomonas campestris is required for full pathogenicity Wang JY, Zhou L, Chen B, Sun S, Zhang W, Ming Li M, Tang HZ,Jiang BL, Tang JL & He YW Sci Rep, 2015, 5:18456.
485 Characterization of pseudooxynicotine amine oxidase of Pseudomonas putida S16 that is crucial for nicotine degradation. Hu HY, Wang WW, Tang HZ, and Xu P Sci Rep, 2015, 5:17770.
486 Sustainable production of valuable compound 3-succinoyl-pyridine by genetically engineering Pseudomonas putida using the tobacco waste. Wang WW, Xu P, and Tang HZ Sci Rep, 2015, 5:16411.
487 Synergistic algicidal effect and mechanism of two diketopiperazines produced by Chryseobacterium sp. strain GLY-1106 on the harmful bloom-forming Microcystis aeruginosa Guo X, Liu X, Pan J, Yang H Sci Rep,2015, 5:14720.
488 A novel crosstalk between TLR4- and NOD2-mediated signaling in the regulation of intestinal inflammation Kim H, Zhao Q, Zheng H, Li X, Zhang T, Ma X Sci Rep,2015, 5:12018.
489 The multiple DSF-family QS signals are synthesized from carbohydrate and branched-chain amino acids via the FAS elongation cycle Zhou L, Yu Y, Chen X, Diab AA, Ruan L, He J, Wang H, He YW Sci Rep,2015, 5:13294.
490 Modulation of gut microbiota by berberine and metformin during the treatment of high-fat diet-induced obesity in rats Zhang X, Zhao Y, Xu J, Xue Z, Zhang M, Pang X, Zhang X, Zhao L Sci Rep,2015, 5:14405.
491 Mimicking a natural pathway for de novo biosynthesis: natural vanillin production from accessible carbon sources Ni J, Tao F, Du H, Xu P Sci Rep,2015, 5:13670.
492 In vitro analysis of phosphorothioate modification of DNA reveals substrate recognition by a multiprotein complex Cao B, Zheng X, Cheng Q, Yao F, Zheng T, Ramesh Babu I, Zhou H, Dedon P, You D Sci Rep,2015, 5:12513.
493 Functional identification of a novel gene, moaE, for 3-Succinoylpyridine degradation in Pseudomonas putida S16 Jiang Y, Tang H, Wu G, Xu P Sci Rep,2015, 5:13464.
494 A filifactor alocis-centered co-occurrence group associates with periodontitis across different oral habitats Chen H, Liu Y, Zhang M, Wang G, Qi Z, Bridgewater L, Zhao L, Tang Z, Pang X Sci Rep,2015, 5:9053.
495 Enhancing the light-driven production of D-lactate by engineering cyanobacterium using a combinational strategy Li C, Tao F, Ni J, Wang Y, Yao F, Xu P Sci Rep,2015, 5:9777.
496 Differential responses of gut microbiota to the same prebiotic formula in oligotrophic and eutrophic batch fermentation systems Long W, Xue Z, Zhang Q, Feng Z, Bridgewater L, Wang L, Zhao L, Pang X Sci Rep,2015, 5:13469.
497 Complete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence factors Ou HY, Kuang SN, He X, Molgora BM, Ewing PJ, Deng Z, Osby M, Chen W, Xu HH Sci Rep,2015, 5:8643.
498 Comparative genome analysis reveals the molecular basis of nicotine degradation and survival capacities of Arthrobacter Yao Y, Tang H, Su F, Xu P Sci Rep,2015, 5:8642.
499 Chemical analysis of the Chinese liquor Luzhoulaojiao by comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry Yao F, Yi B, Shen C, Tao F, Liu Y, Lin Z, Xu P Sci Rep,2015, 5:9553.
500 Dual thermosensitive hydrogels assembled from the conserved C-terminal domain of spider dragline silk Qian ZG, Zhou ML, Song WW, Xia XX Biomacromolecules,2015, 16(11):3704-11.
501 SecReT6: a web-based resource for type VI secretion systems found in bacteria Li J, Yao Y, Xu HH, Hao L, Deng Z, Rajakumar K, Ou HY Environ Microbiol,2015, 17(7):2196-202.
502 Identification and characterization of naturally occurring DSF-family quorum sensing signal turnover system in the phytopathogen Xanthomonas Zhou L, Wang XY, Sun S, Yang LC, Jiang BL, He YW Environ Microbiol,2015, 17(11):4646-58.
503 Cytotoxic T cell responses are enhanced by antigen design involving the presentation of MUC1 peptide on cholera toxin B subunit Lu W, Qiu L, Yan Z, Lin Z, Cao M, Hu C, Wang Z, Wang J, Yu Y, Cheng X, Cao P, Li R Oncotarget, 2015, 6(33):34537-48.
504 Engineering validamycin production by tandem deletion of gamma-butyrolactone receptor genes in Streptomyces hygroscopicus 5008 Tan GY, Peng Y, Lu C, Bai L, Zhong JJ Metab Eng,2015, 28:74-81.
505 Engineering the central biosynthetic and secondary metabolic pathways of Pseudomonas aeruginosa strain PA1201 to improve phenazine-1-carboxylic acid production Jin K, Zhou L, Jiang H, Sun S, Fang Y, Liu J, Zhang X, He YW Metab Eng,2015, 32:30-8.
506 The bamboo-eating giant panda harbors a carnivore-like gut microbiota, with excessive seasonal variations Xue Z, Zhang W, Wang L, Hou R, Zhang M, Fei L, Zhang X, Huang H, Bridgewater LC, Jiang Y, Jiang C, Zhao L, Pang X, Zhang Z Mbio, 2015, 6(3):e00022-15.
507 An artificial enzymatic reaction cascade for a cell-free bio-system based on glycerol Gao C, Li Z, Zhang LJ, Wang C, Li K, Ma CQ, Xu P Green Chem,2015, 17(2): 804–807.
508 Production of C3 platform chemicals from CO2 by genetically engineered cyanobacteria Wang Y, Tao F, Ni J, Li C, Xu P Green Chem, 2015, 17(5): 3100–3110.
509 Mechanisms of acid tolerance in bacteria and prospects in biotechnology and bioremediation Liu Y, Tang H, Lin Z, Xu P Biotechnol Adv, 2015, 33(7):1484-92.
510 Recognition and cleavage of 5-methylcytosine DNA by bacterial SRA-HNH proteins Han T, Yamada-Mabuchi M, Zhao G, Li L, Liu G, Ou HY, Deng Z, Zheng Y, He X Nucleic Acids Res, 2015, 43(2):1147-59.
511 Formation of the delta(18,19) double bond and bis(spiroacetal) in salinomycin is atypically catalyzed by SlnM, a methyltransferase-like enzyme. Jiang C, Qi Z, Kang Q, Liu J, Jiang M, Bai L Angew Chem Int Edit, 2015, 54(31):9097-100
 

 

 

 

 

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