2022年代表性论文
| 序号 | 论文名称 | 期刊名称 | 通讯作者（全重室成员） |
| 1 | Protein design: From the aspect of water solubility and stability | Chemical Reviews | 庆睿 |
| 2 | Carbon-negative synthetic biology: Challenges and emerging trends of cyanobacterial technology | Trends in Biotechnology | 陶飞 |
| 3 | Loosely-packed dynamical structures with partially-melted surface being the key for thermophilic argonaute proteins achieving high DNA-cleavage activity | Nucleic Acids Research | 刘倩 |
| 4 | Structural basis of Streptomyces transcription activation by zinc uptake regulator | Nucleic Acids Research | 郑舰艇 |
| 5 | Catalytic trajectory of a dimeric nonribosomal peptide synthetase subunit with an inserted epimerase domain | Nature Communications | 邓子新, 梁晶丹, 汪志军 |
| 6 | Endowing homodimeric carbamoyltransferase GdmN with iterative functions through structural characterization and mechanistic studies | Nature Communications | 白林泉 |
| 7 | Proteome-wide 3D structure prediction provides insights into the ancestral metabolism of ancient archaea and bacteria | Nature Communications | 肖湘 |
| 8 | Radical SAM-dependent ether crosslink in daropeptide biosynthesis | Nature Communications | 丁伟 |
| 9 | Optogenetic tools for microbial synthetic biology | Biotechnology Advances | 童垚俊 |
| 10 | Spatially directed biosynthesis of quantum dots via spidroin templating in Escherichia coli | Angewandte Chemie-International Edition | 夏小霞 |
| 11 | Unexpected role of a short-chain dehydrogenase/reductase family protein in type II polyketide biosynthesis | Angewandte Chemie-International Edition | 蒋明 |
| 12 | Short oligonucleotides facilitate co-transcriptional labeling of RNA at specific positions | Journal of the American Chemical Society | 刘昱 |
| 13 | Synthetic protein condensates for cellular and metabolic engineering | Nature Chemical Biology | 夏小霞 |
| 14 | Biosynthesis of pyrroloindoline-containing natural products | Natural Product Reports | 瞿旭东 |
| 15 | Chemistry and biosynthesis of bacterial polycyclic xanthone natural products | Natural Product Reports | 由德林 |
| 16 | Metabolism analysis of 17 α-ethynylestradiol by Pseudomonas citronellolis SJTE-3 and identification of the functional genes | Journal of Hazardous Materials | 梁如冰 |
| 17 | T4SEfinder: A bioinformatics tool for genome-scale prediction of bacterial type IV secreted effectors using pre-trained protein language model | Briefings in Bioinformatics | 欧竑宇 |
| 18 | Benchmarking of long-read sequencing, assemblers and polishers for yeast genome | Briefings in Bioinformatics | 刘晨光 |
| 19 | Molecular evolution of an aminotransferase based on substrate–enzyme binding energy analysis for efficient valienamine synthesis | ACS Catalysis | 崔莉 |
| 20 | Structural and mechanistic insights into chain release of the polyene PKS thioesterase domain | Acs Catalysis | 白林泉 |
| 21 | Origin of iodine preferential attack at sulfur in phosphorothioate and subsequent P-O or P-S bond dissociation | Proceedings of the National Academy of Sciences of the United States of America | 赵一雷 |
| 22 | Argonaute-integrated isothermal amplification for rapid, portable, multiplex detection of SARS-CoV-2 and influenza viruses | Biosensors & Bioelectronics | 冯雁 |
| 23 | Manipulating cell flocculation-associated protein kinases in Saccharomyces cerevisiae enables improved stress tolerance and efficient cellulosic ethanol production | Bioresource Technology | 赵心清 |
| 24 | Construction of biocatalytic cascades for the synthesis of benzylisoquinoline alkaloids from p-coumaric acid derivatives and dopamine | Green Chemistry | 肖毅 |
| 25 | Direct carbon capture for the production of high-performance biodegradable plastics by cyanobacterial cell factories | Green Chemistry | 许平 |
| 26 | Iron (oxyhydr)oxides shift the methanogenic community in deep sea methanic sediment-insights from long-term high-pressure incubations | Science of the Total Environment | 王风平 |
| 27 | Soil bioremediation by Pseudomonas brassicacearum MPDS and its enzyme involved in degrading PAHs | Science of the Total Environment | 唐鸿志 |
| 28 | Expanding Asgard members in the domain of Archaea sheds new light on the origin of eukaryotes | Science China-Life Sciences | 王风平 |
| 29 | DsrA modulates central carbon metabolism and redox balance by directly repressing pflB expression in Salmonella Typhimurium | Microbiology Spectrum | 史贤明 |
| 30 | Role of cytochrome P450 genes of Trichoderma atroviride T23 on the resistance and degradation of dichlorvos | Chemosphere | 陈捷 |
| 31 | Intrinsic chlorine resistance of bacteria modulated by glutaminyl-tRNA | Chemosphere | 白晓慧 |
| 32 | biosynthesis in drinking water supply systems | ||
| 33 | Secretory production of spider silk proteins in metabolically engineered Corynebacterium glutamicum for spinning into tough fibers | Metabolic Engineering | 钱志刚, 夏小霞 |
| 34 | A novel Diaphorobacter sp. strain isolated from saponification wastewater shows highly efficient phenanthrene degradation | Environmental Research | 唐鸿志 |
| 35 | Base-specific RNA force field improving the dynamics conformation of nucleotide | International Journal of Biological Macromolecules | 陈海峰 |
| 36 | Enabling QTY server for designing water-soluble α-helical transmembrane proteins | Mbio | 陶飞, 许平 |
| 37 | The plant defense signal salicylic acid activates the RpfB-dependent quorum sensing signal turnover via altering the culture and cytoplasmic pH in the phytopathogen Xanthomonas campestris | Mbio | 何亚文 |
| 38 | Lipid turnover and SQUAMOSA promoter-binding proteins mediate variation in fatty acid desaturation under early nitrogen deprivation revealed by lipidomic and transcriptomic analyses in Chlorella pyrenoidosa | Frontiers in Plant Science | 缪晓玲 |
| 39 | Developing a CRISPR-assisted base-editing system for genome engineering of Pseudomonas chlororaphis | Microbial Biotechnology | 胡洪波 |
| 40 | The Streptomyces viridochromogenes product template domain represents an evolutionary intermediate between dehydratase and aldol cyclase of type I polyketide synthases | Communications Biology | 郑舰艇 |
| 41 | Designing synthetic consortia of Trichoderma strains that improve antagonistic activities against pathogens and cucumber seedling growth | Microbial Cell Factories | 陈捷 |
| 42 | Selenium-enriched Bifidobacterium longum DD98 effectively ameliorates dextran sulfate sodium-induced ulcerative colitis in mice | Frontiers in Microbiology | 陈代杰 |
| 43 | Biosynthesis of a novel ganoderic acid by expressing CYP genes from Ganoderma lucidum in Saccharomyces cerevisiae | Applied Microbiology and Biotechnology | 钟建江 |
| 44 | Cultivation and metabolic insights of an uncultured clade, Bacteroidetes VC2.1 Bac22 (Candidatus Sulfidibacteriales ord. nov.), from deep-sea hydrothermal vents | Environmental Microbiology | 肖湘 |
| 45 | Wide distribution of the sad gene cluster for sub-terminal oxidation in alkane utilizers | Environmental Microbiology | 周宁一 |
| 46 | Adenine base editing system for Pseudomonas and prediction workflow for protein dysfunction via ABE | Acs Synthetic Biology | 肖毅 |
| 47 | Genome mining discovery of a new benzazepine alkaloid pseudofisnin a from the marine fungus Neosartorya pseudofischeri F27-1 | Antibiotics-Basel | 唐满成 |
| 48 | Development of artificial synthetic pathway of endophenazines in Pseudomonas chlororaphis P3 | Biology-Basel | 张雪洪 |
| 49 | Isolation of a novel thermophilic methanogen and the evolutionary history of the class Methanobacteria | Biology-Basel | 王寅炤 |
| 50 | A validated set of ascorbate peroxidase-based organelle markers for electron microscopy of Saccharomyces cerevisiae | Msphere | 谢志平 |
| 51 | Biodegradation of 3-chloronitrobenzene and 3-bromonitrobenzene by Diaphorobacter sp. strain JS3051 | Applied and Environmental Microbiology | 李涛 |
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